Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CISHQ9NSE2 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CISHQ9NSE2 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CISHQ9NSE2 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
CISHQ9NSE2 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC15.77■□□□□ 0.12
CISHQ9NSE2 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
CISHQ9NSE2 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC15.77■□□□□ 0.12
CISHQ9NSE2 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC15.77■□□□□ 0.12
CISHQ9NSE2 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CISHQ9NSE2 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC15.77■□□□□ 0.12
CISHQ9NSE2 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
CISHQ9NSE2 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC15.77■□□□□ 0.12
CISHQ9NSE2 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
CISHQ9NSE2 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC15.77■□□□□ 0.12
CISHQ9NSE2 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC15.77■□□□□ 0.12
CISHQ9NSE2 CICP12-201ENST00000455801 843 ntBASIC15.77■□□□□ 0.12
CISHQ9NSE2 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC15.77■□□□□ 0.12
CISHQ9NSE2 ACR-203ENST00000529621 708 ntTSL 5 BASIC15.77■□□□□ 0.12
CISHQ9NSE2 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC15.77■□□□□ 0.12
CISHQ9NSE2 EEF1DP1-201ENST00000585891 896 ntBASIC15.77■□□□□ 0.12
CISHQ9NSE2 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC15.77■□□□□ 0.12
CISHQ9NSE2 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC15.77■□□□□ 0.12
CISHQ9NSE2 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC15.77■□□□□ 0.12
CISHQ9NSE2 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
CISHQ9NSE2 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CISHQ9NSE2 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CISHQ9NSE2 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.11
CISHQ9NSE2 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CISHQ9NSE2 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC15.77■□□□□ 0.11
CISHQ9NSE2 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
CISHQ9NSE2 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.11
CISHQ9NSE2 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.11
CISHQ9NSE2 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
CISHQ9NSE2 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CISHQ9NSE2 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
CISHQ9NSE2 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC15.77■□□□□ 0.11
CISHQ9NSE2 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CISHQ9NSE2 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CISHQ9NSE2 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
CISHQ9NSE2 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
CISHQ9NSE2 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CISHQ9NSE2 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CISHQ9NSE2 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC15.76■□□□□ 0.11
CISHQ9NSE2 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CISHQ9NSE2 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC15.76■□□□□ 0.11
CISHQ9NSE2 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC15.76■□□□□ 0.11
CISHQ9NSE2 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
CISHQ9NSE2 MIR326-201ENST00000362220 95 ntBASIC15.76■□□□□ 0.11
CISHQ9NSE2 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CISHQ9NSE2 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
CISHQ9NSE2 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC15.76■□□□□ 0.11
CISHQ9NSE2 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC15.76■□□□□ 0.11
CISHQ9NSE2 AC079178.1-201ENST00000420915 656 ntBASIC15.76■□□□□ 0.11
CISHQ9NSE2 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
CISHQ9NSE2 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC15.76■□□□□ 0.11
CISHQ9NSE2 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC15.76■□□□□ 0.11
CISHQ9NSE2 RNF41-210ENST00000552244 716 ntTSL 3 BASIC15.76■□□□□ 0.11
CISHQ9NSE2 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC15.76■□□□□ 0.11
CISHQ9NSE2 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
CISHQ9NSE2 Six3os1_5.1-201ENST00000611000 271 ntBASIC15.76■□□□□ 0.11
CISHQ9NSE2 AC244157.2-201ENST00000616239 1006 ntBASIC15.76■□□□□ 0.11
CISHQ9NSE2 AC027601.3-201ENST00000622907 509 ntBASIC15.76■□□□□ 0.11
CISHQ9NSE2 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CISHQ9NSE2 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
CISHQ9NSE2 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
CISHQ9NSE2 AL009178.2-201ENST00000597278 2719 ntBASIC15.76■□□□□ 0.11
CISHQ9NSE2 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CISHQ9NSE2 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CISHQ9NSE2 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC15.76■□□□□ 0.11
CISHQ9NSE2 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
CISHQ9NSE2 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CISHQ9NSE2 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
CISHQ9NSE2 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CISHQ9NSE2 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC15.76■□□□□ 0.11
CISHQ9NSE2 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC15.76■□□□□ 0.11
CISHQ9NSE2 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CISHQ9NSE2 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
CISHQ9NSE2 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC15.76■□□□□ 0.11
CISHQ9NSE2 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CISHQ9NSE2 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
CISHQ9NSE2 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
CISHQ9NSE2 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CISHQ9NSE2 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC15.75■□□□□ 0.11
CISHQ9NSE2 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC15.75■□□□□ 0.11
CISHQ9NSE2 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CISHQ9NSE2 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
CISHQ9NSE2 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC15.75■□□□□ 0.11
CISHQ9NSE2 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CISHQ9NSE2 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CISHQ9NSE2 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CISHQ9NSE2 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CISHQ9NSE2 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CISHQ9NSE2 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC15.75■□□□□ 0.11
CISHQ9NSE2 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CISHQ9NSE2 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC15.75■□□□□ 0.11
CISHQ9NSE2 AL583810.1-201ENST00000553344 1045 ntBASIC15.75■□□□□ 0.11
CISHQ9NSE2 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC15.75■□□□□ 0.11
CISHQ9NSE2 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC15.75■□□□□ 0.11
CISHQ9NSE2 AL359881.2-201ENST00000602973 570 ntBASIC15.75■□□□□ 0.11
CISHQ9NSE2 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC15.75■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 263.2 ms