Protein–RNA interactions for Protein: Q96RY5

CRAMP1, Protein cramped-like, humanhuman

Predictions only

Length 1,269 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRAMP1Q96RY5 SLC12A5-219ENST00000628272 401 ntTSL 3 BASIC17.79■□□□□ 0.44
CRAMP1Q96RY5 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
CRAMP1Q96RY5 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CRAMP1Q96RY5 C3orf52-202ENST00000431717 2054 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
CRAMP1Q96RY5 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC17.79■□□□□ 0.44
CRAMP1Q96RY5 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
CRAMP1Q96RY5 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC17.79■□□□□ 0.44
CRAMP1Q96RY5 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC17.79■□□□□ 0.44
CRAMP1Q96RY5 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CRAMP1Q96RY5 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC17.79■□□□□ 0.44
CRAMP1Q96RY5 ATF4-202ENST00000396680 1419 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CRAMP1Q96RY5 BFAR-203ENST00000562442 1414 ntTSL 2 BASIC17.79■□□□□ 0.44
CRAMP1Q96RY5 MRM2-201ENST00000242257 1601 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CRAMP1Q96RY5 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC17.79■□□□□ 0.44
CRAMP1Q96RY5 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
CRAMP1Q96RY5 STK24-203ENST00000397517 4578 ntTSL 2 BASIC17.79■□□□□ 0.44
CRAMP1Q96RY5 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CRAMP1Q96RY5 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC17.79■□□□□ 0.44
CRAMP1Q96RY5 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CRAMP1Q96RY5 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CRAMP1Q96RY5 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CRAMP1Q96RY5 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CRAMP1Q96RY5 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
CRAMP1Q96RY5 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CRAMP1Q96RY5 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CRAMP1Q96RY5 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CRAMP1Q96RY5 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC17.78■□□□□ 0.44
CRAMP1Q96RY5 LILRA2-203ENST00000391737 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
CRAMP1Q96RY5 LAP3P2-201ENST00000454686 1454 ntBASIC17.78■□□□□ 0.44
CRAMP1Q96RY5 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
CRAMP1Q96RY5 PTTG1IP-202ENST00000397886 755 ntTSL 4 BASIC17.78■□□□□ 0.44
CRAMP1Q96RY5 CELP-201ENST00000411440 1249 ntTSL 5 BASIC17.78■□□□□ 0.44
CRAMP1Q96RY5 AC108462.1-201ENST00000457467 850 ntTSL 3 BASIC17.78■□□□□ 0.44
CRAMP1Q96RY5 DMKN-229ENST00000467637 827 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
CRAMP1Q96RY5 NSD1-211ENST00000511258 809 ntTSL 3 BASIC17.78■□□□□ 0.44
CRAMP1Q96RY5 SKA2-205ENST00000580541 689 ntTSL 3 BASIC17.78■□□□□ 0.44
CRAMP1Q96RY5 AC020934.2-201ENST00000592400 456 ntTSL 3 BASIC17.78■□□□□ 0.44
CRAMP1Q96RY5 NAMA-206ENST00000605377 509 ntTSL 5 BASIC17.78■□□□□ 0.44
CRAMP1Q96RY5 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC17.78■□□□□ 0.44
CRAMP1Q96RY5 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
CRAMP1Q96RY5 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC17.78■□□□□ 0.44
CRAMP1Q96RY5 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
CRAMP1Q96RY5 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC17.78■□□□□ 0.44
CRAMP1Q96RY5 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CRAMP1Q96RY5 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CRAMP1Q96RY5 AGGF1P1-201ENST00000509500 2073 ntBASIC17.78■□□□□ 0.44
CRAMP1Q96RY5 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CRAMP1Q96RY5 SARS2-202ENST00000430193 1886 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
CRAMP1Q96RY5 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC17.77■□□□□ 0.44
CRAMP1Q96RY5 ARMC8-213ENST00000470821 1656 ntTSL 5 BASIC17.77■□□□□ 0.44
CRAMP1Q96RY5 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CRAMP1Q96RY5 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC17.77■□□□□ 0.44
CRAMP1Q96RY5 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC17.77■□□□□ 0.44
CRAMP1Q96RY5 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
CRAMP1Q96RY5 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
CRAMP1Q96RY5 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
CRAMP1Q96RY5 OPRM1-201ENST00000229768 1465 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CRAMP1Q96RY5 OPRM1-207ENST00000428397 1481 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
CRAMP1Q96RY5 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC17.77■□□□□ 0.44
CRAMP1Q96RY5 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CRAMP1Q96RY5 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
CRAMP1Q96RY5 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CRAMP1Q96RY5 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC17.77■□□□□ 0.44
CRAMP1Q96RY5 TTPAL-203ENST00000372906 1139 ntTSL 3 BASIC17.77■□□□□ 0.44
CRAMP1Q96RY5 TMEM216-202ENST00000398979 908 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CRAMP1Q96RY5 ACTG2-204ENST00000409918 927 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CRAMP1Q96RY5 POLR2H-203ENST00000430783 1159 ntTSL 2 BASIC17.77■□□□□ 0.44
CRAMP1Q96RY5 AL139008.1-201ENST00000437894 228 ntBASIC17.77■□□□□ 0.44
CRAMP1Q96RY5 AC098934.1-203ENST00000442868 1262 ntBASIC17.77■□□□□ 0.44
CRAMP1Q96RY5 AL355376.1-201ENST00000456082 517 ntTSL 3 BASIC17.77■□□□□ 0.44
CRAMP1Q96RY5 AC011247.2-201ENST00000457097 233 ntTSL 4 BASIC17.77■□□□□ 0.44
CRAMP1Q96RY5 TP53AIP1-201ENST00000458238 777 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
CRAMP1Q96RY5 AC024293.1-201ENST00000467930 498 ntBASIC17.77■□□□□ 0.44
CRAMP1Q96RY5 RN7SL396P-201ENST00000471086 295 ntBASIC17.77■□□□□ 0.44
CRAMP1Q96RY5 ROPN1B-203ENST00000505382 713 ntTSL 2 BASIC17.77■□□□□ 0.44
CRAMP1Q96RY5 AC003982.2-201ENST00000536933 365 ntTSL 3 BASIC17.77■□□□□ 0.44
CRAMP1Q96RY5 LINC01154-201ENST00000548617 454 ntTSL 3 BASIC17.77■□□□□ 0.44
CRAMP1Q96RY5 AL133467.4-201ENST00000602953 725 ntBASIC17.77■□□□□ 0.44
CRAMP1Q96RY5 MYOZ3-209ENST00000615557 1031 ntTSL 2 BASIC17.77■□□□□ 0.44
CRAMP1Q96RY5 AC073592.2-201ENST00000623062 780 ntBASIC17.77■□□□□ 0.44
CRAMP1Q96RY5 AC002044.2-201ENST00000624910 970 ntBASIC17.77■□□□□ 0.44
CRAMP1Q96RY5 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
CRAMP1Q96RY5 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC17.77■□□□□ 0.44
CRAMP1Q96RY5 AC010096.1-201ENST00000443897 1709 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CRAMP1Q96RY5 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC17.77■□□□□ 0.44
CRAMP1Q96RY5 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.43
CRAMP1Q96RY5 MINDY4B-201ENST00000465419 1383 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
CRAMP1Q96RY5 ACP2-212ENST00000533929 1366 ntTSL 2 BASIC17.77■□□□□ 0.43
CRAMP1Q96RY5 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CRAMP1Q96RY5 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC17.77■□□□□ 0.43
CRAMP1Q96RY5 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CRAMP1Q96RY5 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
CRAMP1Q96RY5 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CRAMP1Q96RY5 AC008741.2-201ENST00000612792 3115 ntBASIC17.76■□□□□ 0.43
CRAMP1Q96RY5 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC17.76■□□□□ 0.43
CRAMP1Q96RY5 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
CRAMP1Q96RY5 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC17.76■□□□□ 0.43
CRAMP1Q96RY5 LAIR1-209ENST00000434277 1645 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
CRAMP1Q96RY5 NTF3-202ENST00000423158 1336 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CRAMP1Q96RY5 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms