Protein–RNA interactions for Protein: Q96PW8

CSPG4P5, Putative uncharacterized protein KIAA1920, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P5Q96PW8 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CSPG4P5Q96PW8 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
CSPG4P5Q96PW8 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CSPG4P5Q96PW8 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CSPG4P5Q96PW8 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
CSPG4P5Q96PW8 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CSPG4P5Q96PW8 RN7SL832P-201ENST00000607781 1756 ntBASIC15.26■□□□□ 0.03
CSPG4P5Q96PW8 KRT8P4-201ENST00000509735 1454 ntBASIC15.26■□□□□ 0.03
CSPG4P5Q96PW8 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CSPG4P5Q96PW8 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CSPG4P5Q96PW8 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CSPG4P5Q96PW8 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CSPG4P5Q96PW8 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CSPG4P5Q96PW8 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CSPG4P5Q96PW8 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CSPG4P5Q96PW8 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CSPG4P5Q96PW8 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC15.25■□□□□ 0.03
CSPG4P5Q96PW8 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC15.25■□□□□ 0.03
CSPG4P5Q96PW8 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC15.25■□□□□ 0.03
CSPG4P5Q96PW8 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CSPG4P5Q96PW8 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CSPG4P5Q96PW8 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CSPG4P5Q96PW8 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
CSPG4P5Q96PW8 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
CSPG4P5Q96PW8 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC15.25■□□□□ 0.03
CSPG4P5Q96PW8 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CSPG4P5Q96PW8 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
CSPG4P5Q96PW8 ABR-228ENST00000574437 3196 ntTSL 5 BASIC15.25■□□□□ 0.03
CSPG4P5Q96PW8 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CSPG4P5Q96PW8 AC012617.1-204ENST00000586340 2305 ntBASIC15.25■□□□□ 0.03
CSPG4P5Q96PW8 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC15.25■□□□□ 0.03
CSPG4P5Q96PW8 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CSPG4P5Q96PW8 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CSPG4P5Q96PW8 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CSPG4P5Q96PW8 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC15.25■□□□□ 0.03
CSPG4P5Q96PW8 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC15.25■□□□□ 0.03
CSPG4P5Q96PW8 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC15.25■□□□□ 0.03
CSPG4P5Q96PW8 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC15.25■□□□□ 0.03
CSPG4P5Q96PW8 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC15.25■□□□□ 0.03
CSPG4P5Q96PW8 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC15.25■□□□□ 0.03
CSPG4P5Q96PW8 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
CSPG4P5Q96PW8 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
CSPG4P5Q96PW8 ZACNP1-201ENST00000612259 710 ntBASIC15.25■□□□□ 0.03
CSPG4P5Q96PW8 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CSPG4P5Q96PW8 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC15.25■□□□□ 0.03
CSPG4P5Q96PW8 AL035252.4-201ENST00000624174 288 ntBASIC15.25■□□□□ 0.03
CSPG4P5Q96PW8 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
CSPG4P5Q96PW8 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CSPG4P5Q96PW8 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
CSPG4P5Q96PW8 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CSPG4P5Q96PW8 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CSPG4P5Q96PW8 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC15.25■□□□□ 0.03
CSPG4P5Q96PW8 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CSPG4P5Q96PW8 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
CSPG4P5Q96PW8 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CSPG4P5Q96PW8 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
CSPG4P5Q96PW8 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CSPG4P5Q96PW8 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CSPG4P5Q96PW8 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CSPG4P5Q96PW8 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC15.25■□□□□ 0.03
CSPG4P5Q96PW8 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
CSPG4P5Q96PW8 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CSPG4P5Q96PW8 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC15.25■□□□□ 0.03
CSPG4P5Q96PW8 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC15.25■□□□□ 0.03
CSPG4P5Q96PW8 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
CSPG4P5Q96PW8 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CSPG4P5Q96PW8 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CSPG4P5Q96PW8 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC15.24■□□□□ 0.03
CSPG4P5Q96PW8 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CSPG4P5Q96PW8 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC15.24■□□□□ 0.03
CSPG4P5Q96PW8 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CSPG4P5Q96PW8 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
CSPG4P5Q96PW8 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CSPG4P5Q96PW8 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CSPG4P5Q96PW8 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CSPG4P5Q96PW8 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC15.24■□□□□ 0.03
CSPG4P5Q96PW8 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CSPG4P5Q96PW8 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CSPG4P5Q96PW8 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CSPG4P5Q96PW8 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CSPG4P5Q96PW8 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CSPG4P5Q96PW8 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CSPG4P5Q96PW8 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CSPG4P5Q96PW8 ANKRD19P-201ENST00000338192 862 ntBASIC15.24■□□□□ 0.03
CSPG4P5Q96PW8 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CSPG4P5Q96PW8 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
CSPG4P5Q96PW8 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CSPG4P5Q96PW8 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC15.24■□□□□ 0.03
CSPG4P5Q96PW8 AC026954.1-201ENST00000429771 1293 ntBASIC15.24■□□□□ 0.03
CSPG4P5Q96PW8 AC234783.1-201ENST00000441761 496 ntBASIC15.24■□□□□ 0.03
CSPG4P5Q96PW8 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CSPG4P5Q96PW8 KLF2P4-201ENST00000451959 1225 ntBASIC15.24■□□□□ 0.03
CSPG4P5Q96PW8 CTBP2P5-201ENST00000454986 1264 ntBASIC15.24■□□□□ 0.03
CSPG4P5Q96PW8 RAB43P1-201ENST00000561790 589 ntBASIC15.24■□□□□ 0.03
CSPG4P5Q96PW8 PPY2P-201ENST00000582808 702 ntBASIC15.24■□□□□ 0.03
CSPG4P5Q96PW8 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CSPG4P5Q96PW8 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC15.24■□□□□ 0.03
CSPG4P5Q96PW8 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC15.24■□□□□ 0.03
CSPG4P5Q96PW8 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC15.24■□□□□ 0.03
CSPG4P5Q96PW8 MIR6074-201ENST00000612054 107 ntBASIC15.24■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 308.7 ms