Protein–RNA interactions for Protein: Q96DB2

HDAC11, Histone deacetylase 11, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC11Q96DB2 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC15.3■□□□□ 0.04
HDAC11Q96DB2 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
HDAC11Q96DB2 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC15.3■□□□□ 0.04
HDAC11Q96DB2 BTNL10-201ENST00000595971 695 ntBASIC15.3■□□□□ 0.04
HDAC11Q96DB2 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC15.3■□□□□ 0.04
HDAC11Q96DB2 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC15.3■□□□□ 0.04
HDAC11Q96DB2 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC15.3■□□□□ 0.04
HDAC11Q96DB2 INTS4P1-203ENST00000641008 3683 ntBASIC15.3■□□□□ 0.04
HDAC11Q96DB2 AC105233.6-201ENST00000642093 218 ntBASIC15.3■□□□□ 0.04
HDAC11Q96DB2 DCHS1-201ENST00000299441 10765 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
HDAC11Q96DB2 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC15.3■□□□□ 0.04
HDAC11Q96DB2 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC15.3■□□□□ 0.04
HDAC11Q96DB2 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC15.3■□□□□ 0.04
HDAC11Q96DB2 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC15.3■□□□□ 0.04
HDAC11Q96DB2 NRXN1-222ENST00000625672 8113 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
HDAC11Q96DB2 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC15.29■□□□□ 0.04
HDAC11Q96DB2 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
HDAC11Q96DB2 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
HDAC11Q96DB2 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC15.29■□□□□ 0.04
HDAC11Q96DB2 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HDAC11Q96DB2 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC15.29■□□□□ 0.04
HDAC11Q96DB2 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
HDAC11Q96DB2 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
HDAC11Q96DB2 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC15.29■□□□□ 0.04
HDAC11Q96DB2 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC15.29■□□□□ 0.04
HDAC11Q96DB2 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
HDAC11Q96DB2 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC15.29■□□□□ 0.04
HDAC11Q96DB2 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
HDAC11Q96DB2 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
HDAC11Q96DB2 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
HDAC11Q96DB2 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
HDAC11Q96DB2 ZBTB12BP-201ENST00000314232 1122 ntBASIC15.29■□□□□ 0.04
HDAC11Q96DB2 COPE-202ENST00000349893 948 ntTSL 2 BASIC15.29■□□□□ 0.04
HDAC11Q96DB2 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
HDAC11Q96DB2 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC15.29■□□□□ 0.04
HDAC11Q96DB2 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC15.29■□□□□ 0.04
HDAC11Q96DB2 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
HDAC11Q96DB2 C2orf27AP3-201ENST00000434123 579 ntBASIC15.29■□□□□ 0.04
HDAC11Q96DB2 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
HDAC11Q96DB2 BCRP2-202ENST00000447763 634 ntBASIC15.29■□□□□ 0.04
HDAC11Q96DB2 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC15.29■□□□□ 0.04
HDAC11Q96DB2 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC15.29■□□□□ 0.04
HDAC11Q96DB2 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
HDAC11Q96DB2 GCOM2-201ENST00000509133 1104 ntBASIC15.29■□□□□ 0.04
HDAC11Q96DB2 BCRP6-201ENST00000510112 632 ntBASIC15.29■□□□□ 0.04
HDAC11Q96DB2 BCRP7-201ENST00000511549 544 ntBASIC15.29■□□□□ 0.04
HDAC11Q96DB2 AC022447.6-201ENST00000515522 438 ntBASIC15.29■□□□□ 0.04
HDAC11Q96DB2 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC15.29■□□□□ 0.04
HDAC11Q96DB2 VPS18-202ENST00000558474 873 ntTSL 3 BASIC15.29■□□□□ 0.04
HDAC11Q96DB2 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC15.29■□□□□ 0.04
HDAC11Q96DB2 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC15.29■□□□□ 0.04
HDAC11Q96DB2 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC15.29■□□□□ 0.04
HDAC11Q96DB2 AL354718.3-201ENST00000616414 581 ntBASIC15.29■□□□□ 0.04
HDAC11Q96DB2 CR382287.1-201ENST00000623954 586 ntBASIC15.29■□□□□ 0.04
HDAC11Q96DB2 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
HDAC11Q96DB2 KIF21B-201ENST00000332129 9897 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
HDAC11Q96DB2 GOLGA8DP-202ENST00000341390 2184 ntBASIC15.29■□□□□ 0.04
HDAC11Q96DB2 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
HDAC11Q96DB2 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
HDAC11Q96DB2 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HDAC11Q96DB2 LAMB2-202ENST00000418109 5674 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HDAC11Q96DB2 AC092135.3-201ENST00000624151 1846 ntBASIC15.29■□□□□ 0.04
HDAC11Q96DB2 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
HDAC11Q96DB2 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
HDAC11Q96DB2 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC15.29■□□□□ 0.04
HDAC11Q96DB2 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
HDAC11Q96DB2 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
HDAC11Q96DB2 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HDAC11Q96DB2 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
HDAC11Q96DB2 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
HDAC11Q96DB2 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
HDAC11Q96DB2 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC15.28■□□□□ 0.04
HDAC11Q96DB2 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
HDAC11Q96DB2 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
HDAC11Q96DB2 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
HDAC11Q96DB2 CEMIP-201ENST00000220244 7226 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HDAC11Q96DB2 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
HDAC11Q96DB2 MYLK-208ENST00000475616 5745 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
HDAC11Q96DB2 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HDAC11Q96DB2 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC15.28■□□□□ 0.04
HDAC11Q96DB2 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC15.28■□□□□ 0.04
HDAC11Q96DB2 AC015802.1-201ENST00000588104 1449 ntBASIC15.28■□□□□ 0.04
HDAC11Q96DB2 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
HDAC11Q96DB2 AGGF1P1-201ENST00000509500 2073 ntBASIC15.28■□□□□ 0.04
HDAC11Q96DB2 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC15.28■□□□□ 0.04
HDAC11Q96DB2 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC15.28■□□□□ 0.04
HDAC11Q96DB2 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
HDAC11Q96DB2 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HDAC11Q96DB2 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HDAC11Q96DB2 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC15.28■□□□□ 0.04
HDAC11Q96DB2 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HDAC11Q96DB2 BX640514.1-201ENST00000583223 1918 ntBASIC15.28■□□□□ 0.04
HDAC11Q96DB2 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HDAC11Q96DB2 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
HDAC11Q96DB2 TPM3P8-201ENST00000330554 643 ntBASIC15.28■□□□□ 0.04
HDAC11Q96DB2 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
HDAC11Q96DB2 FTH1P14-201ENST00000482930 551 ntBASIC15.28■□□□□ 0.04
HDAC11Q96DB2 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
HDAC11Q96DB2 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HDAC11Q96DB2 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 85.2 ms