Protein–RNA interactions for Protein: Q96AY4

TTC28, Tetratricopeptide repeat protein 28, humanhuman

Predictions only

Length 2,481 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28Q96AY4 AC093700.1-201ENST00000503348 717 ntBASIC14.58□□□□□ -0.07
TTC28Q96AY4 VEGFA-219ENST00000518824 606 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
TTC28Q96AY4 CSRP2-203ENST00000547435 632 ntTSL 2 BASIC14.58□□□□□ -0.07
TTC28Q96AY4 RN7SL556P-201ENST00000582856 298 ntBASIC14.58□□□□□ -0.07
TTC28Q96AY4 AC148476.1-201ENST00000622182 705 ntBASIC14.58□□□□□ -0.07
TTC28Q96AY4 AL121956.4-201ENST00000629925 581 ntTSL 5 BASIC14.58□□□□□ -0.07
TTC28Q96AY4 SULT1A1-203ENST00000395607 1386 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.07
TTC28Q96AY4 AC097474.1-201ENST00000506481 1371 ntBASIC14.58□□□□□ -0.07
TTC28Q96AY4 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC14.58□□□□□ -0.07
TTC28Q96AY4 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.07
TTC28Q96AY4 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.07
TTC28Q96AY4 EML3-216ENST00000529309 2909 ntTSL 2 BASIC14.58□□□□□ -0.08
TTC28Q96AY4 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TTC28Q96AY4 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
TTC28Q96AY4 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC14.58□□□□□ -0.08
TTC28Q96AY4 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
TTC28Q96AY4 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
TTC28Q96AY4 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
TTC28Q96AY4 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC14.58□□□□□ -0.08
TTC28Q96AY4 MRPS10-201ENST00000053468 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TTC28Q96AY4 AC023090.2-201ENST00000625182 2110 ntBASIC14.58□□□□□ -0.08
TTC28Q96AY4 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
TTC28Q96AY4 ORC6-201ENST00000219097 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TTC28Q96AY4 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
TTC28Q96AY4 TAGLN2-203ENST00000368097 1604 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TTC28Q96AY4 KCNIP1-210ENST00000636734 1613 ntTSL 5 BASIC14.58□□□□□ -0.08
TTC28Q96AY4 MRGPRX4-201ENST00000314254 1444 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
TTC28Q96AY4 OXGR1-204ENST00000543457 1305 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TTC28Q96AY4 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC14.58□□□□□ -0.08
TTC28Q96AY4 VPS25-201ENST00000253794 1101 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TTC28Q96AY4 HIGD2B-201ENST00000311755 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TTC28Q96AY4 IGF2-201ENST00000381389 1023 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
TTC28Q96AY4 AL136084.1-201ENST00000449172 318 ntBASIC14.58□□□□□ -0.08
TTC28Q96AY4 AL445471.1-201ENST00000456316 820 ntTSL 5 BASIC14.58□□□□□ -0.08
TTC28Q96AY4 AC007679.1-201ENST00000458609 502 ntBASIC14.58□□□□□ -0.08
TTC28Q96AY4 AC009065.4-201ENST00000563734 543 ntTSL 3 BASIC14.58□□□□□ -0.08
TTC28Q96AY4 CLDN6-203ENST00000572154 461 ntTSL 3 BASIC14.58□□□□□ -0.08
TTC28Q96AY4 AC005498.2-204ENST00000590613 413 ntTSL 3 BASIC14.58□□□□□ -0.08
TTC28Q96AY4 USE1-207ENST00000596136 637 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
TTC28Q96AY4 DUX4L33-201ENST00000635217 958 ntBASIC14.58□□□□□ -0.08
TTC28Q96AY4 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TTC28Q96AY4 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
TTC28Q96AY4 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TTC28Q96AY4 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TTC28Q96AY4 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC14.58□□□□□ -0.08
TTC28Q96AY4 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TTC28Q96AY4 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
TTC28Q96AY4 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC14.58□□□□□ -0.08
TTC28Q96AY4 TUBAL3-201ENST00000380419 1798 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TTC28Q96AY4 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TTC28Q96AY4 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TTC28Q96AY4 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC14.57□□□□□ -0.08
TTC28Q96AY4 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC14.57□□□□□ -0.08
TTC28Q96AY4 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TTC28Q96AY4 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TTC28Q96AY4 GAPDH-202ENST00000396856 1266 ntTSL 5 BASIC14.57□□□□□ -0.08
TTC28Q96AY4 C3orf84-201ENST00000432035 669 ntAPPRIS ALT1 TSL 5 BASIC14.57□□□□□ -0.08
TTC28Q96AY4 LINC01824-201ENST00000436082 528 ntTSL 4 BASIC14.57□□□□□ -0.08
TTC28Q96AY4 AC025419.1-201ENST00000537250 690 ntTSL 3 BASIC14.57□□□□□ -0.08
TTC28Q96AY4 MIR1587-201ENST00000583319 53 ntBASIC14.57□□□□□ -0.08
TTC28Q96AY4 AC245100.4-201ENST00000634549 1082 ntTSL 5 BASIC14.57□□□□□ -0.08
TTC28Q96AY4 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC14.57□□□□□ -0.08
TTC28Q96AY4 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TTC28Q96AY4 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
TTC28Q96AY4 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC14.57□□□□□ -0.08
TTC28Q96AY4 AC021683.1-201ENST00000585798 1767 ntTSL 5 BASIC14.57□□□□□ -0.08
TTC28Q96AY4 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC14.57□□□□□ -0.08
TTC28Q96AY4 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
TTC28Q96AY4 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
TTC28Q96AY4 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC14.57□□□□□ -0.08
TTC28Q96AY4 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TTC28Q96AY4 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
TTC28Q96AY4 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
TTC28Q96AY4 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC14.57□□□□□ -0.08
TTC28Q96AY4 ILF3-AS1-201ENST00000591501 1983 ntBASIC14.57□□□□□ -0.08
TTC28Q96AY4 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
TTC28Q96AY4 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TTC28Q96AY4 CLUL1-202ENST00000400606 1943 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TTC28Q96AY4 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
TTC28Q96AY4 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
TTC28Q96AY4 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC14.57□□□□□ -0.08
TTC28Q96AY4 NANOS3-202ENST00000397555 769 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
TTC28Q96AY4 RASGRF2-AS1-202ENST00000505694 535 ntTSL 3 BASIC14.57□□□□□ -0.08
TTC28Q96AY4 SNRPN-208ENST00000577565 1298 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
TTC28Q96AY4 SMIM22-207ENST00000589721 822 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
TTC28Q96AY4 AC090004.1-201ENST00000608606 653 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
TTC28Q96AY4 AC126755.5-201ENST00000622756 267 ntBASIC14.57□□□□□ -0.08
TTC28Q96AY4 AC005609.5-201ENST00000624712 1053 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
TTC28Q96AY4 PFDN5-220ENST00000628881 231 ntTSL 3 BASIC14.57□□□□□ -0.08
TTC28Q96AY4 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC14.57□□□□□ -0.08
TTC28Q96AY4 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC14.57□□□□□ -0.08
TTC28Q96AY4 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
TTC28Q96AY4 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TTC28Q96AY4 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
TTC28Q96AY4 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
TTC28Q96AY4 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
TTC28Q96AY4 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC14.57□□□□□ -0.08
TTC28Q96AY4 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC14.57□□□□□ -0.08
TTC28Q96AY4 GOSR2-231ENST00000640007 1425 ntTSL 5 BASIC14.57□□□□□ -0.08
TTC28Q96AY4 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 69.7 ms