Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC14.32□□□□□ -0.12
VPS33AQ96AX1 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC14.32□□□□□ -0.12
VPS33AQ96AX1 AC026410.3-201ENST00000514280 936 ntBASIC14.32□□□□□ -0.12
VPS33AQ96AX1 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC14.32□□□□□ -0.12
VPS33AQ96AX1 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC14.32□□□□□ -0.12
VPS33AQ96AX1 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC14.32□□□□□ -0.12
VPS33AQ96AX1 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
VPS33AQ96AX1 AC025678.2-201ENST00000562061 970 ntBASIC14.32□□□□□ -0.12
VPS33AQ96AX1 AC004449.1-201ENST00000564240 433 ntBASIC14.32□□□□□ -0.12
VPS33AQ96AX1 AC015911.4-201ENST00000588022 1070 ntBASIC14.32□□□□□ -0.12
VPS33AQ96AX1 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC14.32□□□□□ -0.12
VPS33AQ96AX1 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
VPS33AQ96AX1 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
VPS33AQ96AX1 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
VPS33AQ96AX1 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
VPS33AQ96AX1 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
VPS33AQ96AX1 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
VPS33AQ96AX1 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC14.32□□□□□ -0.12
VPS33AQ96AX1 KIRREL1-204ENST00000368173 7519 ntTSL 2 BASIC14.32□□□□□ -0.12
VPS33AQ96AX1 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
VPS33AQ96AX1 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
VPS33AQ96AX1 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
VPS33AQ96AX1 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
VPS33AQ96AX1 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
VPS33AQ96AX1 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
VPS33AQ96AX1 C10orf71-201ENST00000374144 5230 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
VPS33AQ96AX1 ZNF570-201ENST00000330173 5559 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
VPS33AQ96AX1 NFATC1-205ENST00000427363 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
VPS33AQ96AX1 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
VPS33AQ96AX1 LSS-211ENST00000522411 2523 ntTSL 2 BASIC14.32□□□□□ -0.12
VPS33AQ96AX1 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC14.31□□□□□ -0.12
VPS33AQ96AX1 OPRL1-201ENST00000336866 3321 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
VPS33AQ96AX1 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
VPS33AQ96AX1 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
VPS33AQ96AX1 CR383656.2-201ENST00000548656 2254 ntBASIC14.31□□□□□ -0.12
VPS33AQ96AX1 MRVI1-204ENST00000527509 2686 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
VPS33AQ96AX1 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
VPS33AQ96AX1 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
VPS33AQ96AX1 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC14.31□□□□□ -0.12
VPS33AQ96AX1 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
VPS33AQ96AX1 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
VPS33AQ96AX1 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC14.31□□□□□ -0.12
VPS33AQ96AX1 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
VPS33AQ96AX1 PDE8A-201ENST00000310298 3984 ntAPPRIS P4 TSL 1 (best) BASIC14.31□□□□□ -0.12
VPS33AQ96AX1 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
VPS33AQ96AX1 PRR34-201ENST00000396008 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
VPS33AQ96AX1 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
VPS33AQ96AX1 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
VPS33AQ96AX1 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
VPS33AQ96AX1 CELF1-214ENST00000531165 3650 ntTSL 2 BASIC14.31□□□□□ -0.12
VPS33AQ96AX1 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
VPS33AQ96AX1 GDAP1L1-206ENST00000537864 2855 ntTSL 2 BASIC14.31□□□□□ -0.12
VPS33AQ96AX1 MKL1-202ENST00000396617 4505 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
VPS33AQ96AX1 FBXO21-202ENST00000427718 4138 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
VPS33AQ96AX1 GORASP1-201ENST00000319283 3722 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
VPS33AQ96AX1 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC14.31□□□□□ -0.12
VPS33AQ96AX1 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
VPS33AQ96AX1 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC14.31□□□□□ -0.12
VPS33AQ96AX1 CEMIP-201ENST00000220244 7226 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
VPS33AQ96AX1 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
VPS33AQ96AX1 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC14.31□□□□□ -0.12
VPS33AQ96AX1 AL645937.2-201ENST00000396808 931 ntBASIC14.31□□□□□ -0.12
VPS33AQ96AX1 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC14.31□□□□□ -0.12
VPS33AQ96AX1 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC14.31□□□□□ -0.12
VPS33AQ96AX1 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC14.31□□□□□ -0.12
VPS33AQ96AX1 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC14.31□□□□□ -0.12
VPS33AQ96AX1 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC14.31□□□□□ -0.12
VPS33AQ96AX1 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
VPS33AQ96AX1 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC14.31□□□□□ -0.12
VPS33AQ96AX1 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
VPS33AQ96AX1 MAPT-IT1-201ENST00000624111 3016 ntBASIC14.31□□□□□ -0.12
VPS33AQ96AX1 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC14.31□□□□□ -0.12
VPS33AQ96AX1 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
VPS33AQ96AX1 E2F7-201ENST00000322886 5740 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
VPS33AQ96AX1 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC14.31□□□□□ -0.12
VPS33AQ96AX1 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC14.31□□□□□ -0.12
VPS33AQ96AX1 MYOM3-202ENST00000374434 5804 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
VPS33AQ96AX1 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
VPS33AQ96AX1 KIAA1217-203ENST00000376452 6052 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
VPS33AQ96AX1 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
VPS33AQ96AX1 INE2-201ENST00000630399 1874 ntBASIC14.31□□□□□ -0.12
VPS33AQ96AX1 AC015802.6-201ENST00000640006 5654 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
VPS33AQ96AX1 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
VPS33AQ96AX1 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
VPS33AQ96AX1 SLC37A4-216ENST00000538950 2032 ntTSL 5 BASIC14.31□□□□□ -0.12
VPS33AQ96AX1 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC14.31□□□□□ -0.12
VPS33AQ96AX1 CCSER2-203ENST00000372088 7657 ntTSL 2 BASIC14.3□□□□□ -0.12
VPS33AQ96AX1 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC14.3□□□□□ -0.12
VPS33AQ96AX1 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC14.3□□□□□ -0.12
VPS33AQ96AX1 SACM1L-201ENST00000389061 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
VPS33AQ96AX1 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC14.3□□□□□ -0.12
VPS33AQ96AX1 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
VPS33AQ96AX1 FHOD3-201ENST00000257209 4967 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
VPS33AQ96AX1 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
VPS33AQ96AX1 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
VPS33AQ96AX1 AL121992.1-201ENST00000428945 2845 ntTSL 2 BASIC14.3□□□□□ -0.12
VPS33AQ96AX1 SPPL2A-201ENST00000261854 7372 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
VPS33AQ96AX1 DUSP28-202ENST00000405954 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
VPS33AQ96AX1 TMEM104-201ENST00000335464 4745 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
VPS33AQ96AX1 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC14.3□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 78.5 ms