Protein–RNA interactions for Protein: Q969K7

TMEM54, Transmembrane protein 54, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54Q969K7 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
TMEM54Q969K7 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TMEM54Q969K7 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TMEM54Q969K7 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC13.01□□□□□ -0.33
TMEM54Q969K7 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC13.01□□□□□ -0.33
TMEM54Q969K7 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
TMEM54Q969K7 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
TMEM54Q969K7 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TMEM54Q969K7 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC13.01□□□□□ -0.33
TMEM54Q969K7 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TMEM54Q969K7 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
TMEM54Q969K7 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
TMEM54Q969K7 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TMEM54Q969K7 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TMEM54Q969K7 MIR326-201ENST00000362220 95 ntBASIC13.01□□□□□ -0.33
TMEM54Q969K7 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC13.01□□□□□ -0.33
TMEM54Q969K7 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC13.01□□□□□ -0.33
TMEM54Q969K7 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC13.01□□□□□ -0.33
TMEM54Q969K7 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC13.01□□□□□ -0.33
TMEM54Q969K7 AC099336.1-201ENST00000417053 1171 ntBASIC13.01□□□□□ -0.33
TMEM54Q969K7 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC13.01□□□□□ -0.33
TMEM54Q969K7 CSF2RBP1-201ENST00000447905 391 ntBASIC13.01□□□□□ -0.33
TMEM54Q969K7 AC022210.1-201ENST00000449856 793 ntBASIC13.01□□□□□ -0.33
TMEM54Q969K7 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC13.01□□□□□ -0.33
TMEM54Q969K7 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC13.01□□□□□ -0.33
TMEM54Q969K7 AP005482.1-201ENST00000563722 1273 ntBASIC13.01□□□□□ -0.33
TMEM54Q969K7 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
TMEM54Q969K7 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
TMEM54Q969K7 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC13.01□□□□□ -0.33
TMEM54Q969K7 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
TMEM54Q969K7 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC13.01□□□□□ -0.33
TMEM54Q969K7 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC13.01□□□□□ -0.33
TMEM54Q969K7 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TMEM54Q969K7 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
TMEM54Q969K7 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
TMEM54Q969K7 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
TMEM54Q969K7 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
TMEM54Q969K7 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
TMEM54Q969K7 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
TMEM54Q969K7 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TMEM54Q969K7 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TMEM54Q969K7 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC13.01□□□□□ -0.33
TMEM54Q969K7 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TMEM54Q969K7 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC13.01□□□□□ -0.33
TMEM54Q969K7 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC13.01□□□□□ -0.33
TMEM54Q969K7 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TMEM54Q969K7 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC13.01□□□□□ -0.33
TMEM54Q969K7 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC13.01□□□□□ -0.33
TMEM54Q969K7 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TMEM54Q969K7 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
TMEM54Q969K7 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC13.01□□□□□ -0.33
TMEM54Q969K7 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TMEM54Q969K7 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TMEM54Q969K7 AC015656.1-201ENST00000624209 3578 ntBASIC13.01□□□□□ -0.33
TMEM54Q969K7 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
TMEM54Q969K7 MIR600HG-201ENST00000449175 5984 ntBASIC13□□□□□ -0.33
TMEM54Q969K7 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
TMEM54Q969K7 AC139749.1-202ENST00000617529 3139 ntBASIC13□□□□□ -0.33
TMEM54Q969K7 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
TMEM54Q969K7 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC13□□□□□ -0.33
TMEM54Q969K7 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
TMEM54Q969K7 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
TMEM54Q969K7 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
TMEM54Q969K7 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC13□□□□□ -0.33
TMEM54Q969K7 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
TMEM54Q969K7 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC13□□□□□ -0.33
TMEM54Q969K7 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC13□□□□□ -0.33
TMEM54Q969K7 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC13□□□□□ -0.33
TMEM54Q969K7 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC13□□□□□ -0.33
TMEM54Q969K7 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC13□□□□□ -0.33
TMEM54Q969K7 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
TMEM54Q969K7 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC13□□□□□ -0.33
TMEM54Q969K7 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
TMEM54Q969K7 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
TMEM54Q969K7 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
TMEM54Q969K7 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC13□□□□□ -0.33
TMEM54Q969K7 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC13□□□□□ -0.33
TMEM54Q969K7 RBM38-204ENST00000371219 760 ntTSL 2 BASIC13□□□□□ -0.33
TMEM54Q969K7 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC13□□□□□ -0.33
TMEM54Q969K7 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
TMEM54Q969K7 STX1A-203ENST00000395155 783 ntTSL 2 BASIC13□□□□□ -0.33
TMEM54Q969K7 HLA-V-201ENST00000429037 534 ntBASIC13□□□□□ -0.33
TMEM54Q969K7 SKA2-202ENST00000437036 625 ntTSL 2 BASIC13□□□□□ -0.33
TMEM54Q969K7 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC13□□□□□ -0.33
TMEM54Q969K7 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC13□□□□□ -0.33
TMEM54Q969K7 AC119751.2-201ENST00000504529 210 ntBASIC13□□□□□ -0.33
TMEM54Q969K7 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC13□□□□□ -0.33
TMEM54Q969K7 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
TMEM54Q969K7 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC13□□□□□ -0.33
TMEM54Q969K7 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC13□□□□□ -0.33
TMEM54Q969K7 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC13□□□□□ -0.33
TMEM54Q969K7 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
TMEM54Q969K7 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC13□□□□□ -0.33
TMEM54Q969K7 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC13□□□□□ -0.33
TMEM54Q969K7 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC13□□□□□ -0.33
TMEM54Q969K7 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
TMEM54Q969K7 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC13□□□□□ -0.33
TMEM54Q969K7 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC13□□□□□ -0.33
TMEM54Q969K7 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC13□□□□□ -0.33
TMEM54Q969K7 GSN-209ENST00000449733 2702 ntTSL 2 BASIC13□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 74.2 ms