Protein–RNA interactions for Protein: Q8TBE3

FNDC9, Fibronectin type III domain-containing protein 9, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC9Q8TBE3 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
FNDC9Q8TBE3 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
FNDC9Q8TBE3 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
FNDC9Q8TBE3 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
FNDC9Q8TBE3 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
FNDC9Q8TBE3 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
FNDC9Q8TBE3 MIR326-201ENST00000362220 95 ntBASIC13.4□□□□□ -0.26
FNDC9Q8TBE3 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
FNDC9Q8TBE3 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC13.4□□□□□ -0.26
FNDC9Q8TBE3 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC13.4□□□□□ -0.26
FNDC9Q8TBE3 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC13.4□□□□□ -0.26
FNDC9Q8TBE3 USB1-203ENST00000539737 1212 ntTSL 2 BASIC13.4□□□□□ -0.26
FNDC9Q8TBE3 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
FNDC9Q8TBE3 MIR4538-201ENST00000581377 78 ntBASIC13.4□□□□□ -0.26
FNDC9Q8TBE3 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC13.4□□□□□ -0.26
FNDC9Q8TBE3 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC13.4□□□□□ -0.26
FNDC9Q8TBE3 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC13.4□□□□□ -0.26
FNDC9Q8TBE3 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC13.4□□□□□ -0.26
FNDC9Q8TBE3 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC13.4□□□□□ -0.26
FNDC9Q8TBE3 ZBED1P1-201ENST00000502364 1930 ntBASIC13.4□□□□□ -0.26
FNDC9Q8TBE3 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC13.4□□□□□ -0.26
FNDC9Q8TBE3 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC13.4□□□□□ -0.26
FNDC9Q8TBE3 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
FNDC9Q8TBE3 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
FNDC9Q8TBE3 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC13.4□□□□□ -0.26
FNDC9Q8TBE3 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC13.4□□□□□ -0.26
FNDC9Q8TBE3 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
FNDC9Q8TBE3 INE2-201ENST00000630399 1874 ntBASIC13.4□□□□□ -0.26
FNDC9Q8TBE3 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
FNDC9Q8TBE3 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
FNDC9Q8TBE3 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
FNDC9Q8TBE3 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
FNDC9Q8TBE3 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC13.39□□□□□ -0.27
FNDC9Q8TBE3 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
FNDC9Q8TBE3 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC13.39□□□□□ -0.27
FNDC9Q8TBE3 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
FNDC9Q8TBE3 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
FNDC9Q8TBE3 AC011840.2-201ENST00000563063 1520 ntBASIC13.39□□□□□ -0.27
FNDC9Q8TBE3 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
FNDC9Q8TBE3 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
FNDC9Q8TBE3 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC13.39□□□□□ -0.27
FNDC9Q8TBE3 AL023775.1-201ENST00000454907 1746 ntBASIC13.39□□□□□ -0.27
FNDC9Q8TBE3 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC13.39□□□□□ -0.27
FNDC9Q8TBE3 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC13.39□□□□□ -0.27
FNDC9Q8TBE3 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
FNDC9Q8TBE3 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
FNDC9Q8TBE3 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
FNDC9Q8TBE3 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
FNDC9Q8TBE3 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC13.39□□□□□ -0.27
FNDC9Q8TBE3 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
FNDC9Q8TBE3 RGS5-214ENST00000429865 754 ntTSL 3 BASIC13.39□□□□□ -0.27
FNDC9Q8TBE3 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
FNDC9Q8TBE3 MTX1P1-201ENST00000440904 838 ntBASIC13.39□□□□□ -0.27
FNDC9Q8TBE3 GOLGA2P4-201ENST00000441462 777 ntBASIC13.39□□□□□ -0.27
FNDC9Q8TBE3 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC13.39□□□□□ -0.27
FNDC9Q8TBE3 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
FNDC9Q8TBE3 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC13.39□□□□□ -0.27
FNDC9Q8TBE3 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
FNDC9Q8TBE3 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
FNDC9Q8TBE3 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC13.39□□□□□ -0.27
FNDC9Q8TBE3 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC13.39□□□□□ -0.27
FNDC9Q8TBE3 CYGB-203ENST00000589145 788 ntTSL 3 BASIC13.39□□□□□ -0.27
FNDC9Q8TBE3 AC091271.1-201ENST00000611877 1162 ntBASIC13.39□□□□□ -0.27
FNDC9Q8TBE3 ZACNP1-201ENST00000612259 710 ntBASIC13.39□□□□□ -0.27
FNDC9Q8TBE3 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
FNDC9Q8TBE3 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
FNDC9Q8TBE3 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC13.39□□□□□ -0.27
FNDC9Q8TBE3 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
FNDC9Q8TBE3 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
FNDC9Q8TBE3 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
FNDC9Q8TBE3 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
FNDC9Q8TBE3 AC020910.5-201ENST00000623668 1865 ntBASIC13.39□□□□□ -0.27
FNDC9Q8TBE3 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
FNDC9Q8TBE3 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC13.39□□□□□ -0.27
FNDC9Q8TBE3 AGAP7P-201ENST00000582299 2062 ntBASIC13.39□□□□□ -0.27
FNDC9Q8TBE3 AGAP14-201ENST00000624701 2060 ntBASIC13.39□□□□□ -0.27
FNDC9Q8TBE3 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
FNDC9Q8TBE3 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC13.39□□□□□ -0.27
FNDC9Q8TBE3 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
FNDC9Q8TBE3 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
FNDC9Q8TBE3 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
FNDC9Q8TBE3 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
FNDC9Q8TBE3 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
FNDC9Q8TBE3 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC13.39□□□□□ -0.27
FNDC9Q8TBE3 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
FNDC9Q8TBE3 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC13.39□□□□□ -0.27
FNDC9Q8TBE3 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
FNDC9Q8TBE3 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC13.39□□□□□ -0.27
FNDC9Q8TBE3 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
FNDC9Q8TBE3 AP000593.2-201ENST00000542775 1433 ntBASIC13.39□□□□□ -0.27
FNDC9Q8TBE3 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
FNDC9Q8TBE3 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC13.39□□□□□ -0.27
FNDC9Q8TBE3 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
FNDC9Q8TBE3 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
FNDC9Q8TBE3 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
FNDC9Q8TBE3 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
FNDC9Q8TBE3 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC13.38□□□□□ -0.27
FNDC9Q8TBE3 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
FNDC9Q8TBE3 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
FNDC9Q8TBE3 RER1-203ENST00000378513 3000 ntTSL 3 BASIC13.38□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 87.5 ms