Protein–RNA interactions for Protein: Q86UE3

ZNF546, Zinc finger protein 546, humanhuman

Predictions only

Length 836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF546Q86UE3 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
ZNF546Q86UE3 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
ZNF546Q86UE3 AGAP10P-201ENST00000454844 2418 ntBASIC12.38□□□□□ -0.43
ZNF546Q86UE3 ATP2C2-AS1-201ENST00000565700 2998 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
ZNF546Q86UE3 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
ZNF546Q86UE3 CCBE1-201ENST00000398179 5979 ntTSL 5 BASIC12.38□□□□□ -0.43
ZNF546Q86UE3 NPNT-211ENST00000506666 2187 ntTSL 2 BASIC12.38□□□□□ -0.43
ZNF546Q86UE3 SUPT7L-203ENST00000405491 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC12.38□□□□□ -0.43
ZNF546Q86UE3 AC093909.1-201ENST00000504731 1122 ntBASIC12.38□□□□□ -0.43
ZNF546Q86UE3 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC12.38□□□□□ -0.43
ZNF546Q86UE3 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC12.38□□□□□ -0.43
ZNF546Q86UE3 AL773604.1-201ENST00000617417 272 ntBASIC12.38□□□□□ -0.43
ZNF546Q86UE3 AL031008.1-201ENST00000619963 541 ntBASIC12.38□□□□□ -0.43
ZNF546Q86UE3 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC12.38□□□□□ -0.43
ZNF546Q86UE3 CCT6B-201ENST00000314144 1838 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
ZNF546Q86UE3 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
ZNF546Q86UE3 TBC1D8-AS1-201ENST00000610202 2478 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
ZNF546Q86UE3 AP001999.1-201ENST00000513405 3684 ntTSL 2 BASIC12.38□□□□□ -0.43
ZNF546Q86UE3 ESPNL-202ENST00000409169 4441 ntTSL 5 BASIC12.38□□□□□ -0.43
ZNF546Q86UE3 NRDC-202ENST00000354831 3895 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
ZNF546Q86UE3 MYO7A-202ENST00000409709 7462 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
ZNF546Q86UE3 NPAS4-201ENST00000311034 3303 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
ZNF546Q86UE3 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
ZNF546Q86UE3 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
ZNF546Q86UE3 CSF2RB-203ENST00000406230 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
ZNF546Q86UE3 TXLNA-201ENST00000373609 5012 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
ZNF546Q86UE3 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC12.38□□□□□ -0.43
ZNF546Q86UE3 JMJD6-203ENST00000445478 5303 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
ZNF546Q86UE3 CDH1-201ENST00000261769 4889 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
ZNF546Q86UE3 ELAVL1-201ENST00000407627 6015 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
ZNF546Q86UE3 WDR26-201ENST00000414423 6872 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
ZNF546Q86UE3 C1orf167-202ENST00000433342 4545 ntAPPRIS P5 TSL 5 BASIC12.38□□□□□ -0.43
ZNF546Q86UE3 RNF220-203ENST00000361799 3009 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
ZNF546Q86UE3 RNF220-204ENST00000372247 3010 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
ZNF546Q86UE3 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
ZNF546Q86UE3 AC239798.2-201ENST00000415338 3540 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
ZNF546Q86UE3 PANX2-202ENST00000395842 3051 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
ZNF546Q86UE3 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
ZNF546Q86UE3 OR52A1-202ENST00000380367 9783 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
ZNF546Q86UE3 SUGP2-203ENST00000452918 6176 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
ZNF546Q86UE3 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
ZNF546Q86UE3 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
ZNF546Q86UE3 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC12.37□□□□□ -0.43
ZNF546Q86UE3 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC12.37□□□□□ -0.43
ZNF546Q86UE3 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
ZNF546Q86UE3 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
ZNF546Q86UE3 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
ZNF546Q86UE3 COL6A3-206ENST00000409809 8916 ntTSL 5 BASIC12.37□□□□□ -0.43
ZNF546Q86UE3 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC12.37□□□□□ -0.43
ZNF546Q86UE3 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC12.37□□□□□ -0.43
ZNF546Q86UE3 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
ZNF546Q86UE3 AQP6-205ENST00000618286 829 ntTSL 5 BASIC12.37□□□□□ -0.43
ZNF546Q86UE3 VPS51-217ENST00000639871 243 ntTSL 5 BASIC12.37□□□□□ -0.43
ZNF546Q86UE3 ALDH3A2-201ENST00000176643 3928 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
ZNF546Q86UE3 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC12.37□□□□□ -0.43
ZNF546Q86UE3 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC12.37□□□□□ -0.43
ZNF546Q86UE3 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC12.37□□□□□ -0.43
ZNF546Q86UE3 RN7SL832P-201ENST00000607781 1756 ntBASIC12.37□□□□□ -0.43
ZNF546Q86UE3 PLXNA1-201ENST00000393409 9066 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
ZNF546Q86UE3 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC12.37□□□□□ -0.43
ZNF546Q86UE3 SNX12-202ENST00000374274 2376 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
ZNF546Q86UE3 NSD2-203ENST00000382888 2666 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
ZNF546Q86UE3 EIF3CL-201ENST00000380876 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
ZNF546Q86UE3 GAB1-202ENST00000262995 7981 ntAPPRIS P4 TSL 1 (best) BASIC12.37□□□□□ -0.43
ZNF546Q86UE3 HSPA1L-201ENST00000375654 2544 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
ZNF546Q86UE3 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC12.37□□□□□ -0.43
ZNF546Q86UE3 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
ZNF546Q86UE3 KY-202ENST00000503669 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
ZNF546Q86UE3 AC010255.3-203ENST00000509403 1727 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
ZNF546Q86UE3 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC12.37□□□□□ -0.43
ZNF546Q86UE3 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC12.37□□□□□ -0.43
ZNF546Q86UE3 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
ZNF546Q86UE3 BCAR1-209ENST00000546196 1340 ntBASIC12.37□□□□□ -0.43
ZNF546Q86UE3 PSME4-202ENST00000404125 7099 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
ZNF546Q86UE3 SLC6A2-201ENST00000219833 2858 ntTSL 5 BASIC12.36□□□□□ -0.43
ZNF546Q86UE3 ELK1-201ENST00000247161 2695 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
ZNF546Q86UE3 C3orf18-206ENST00000449241 2365 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
ZNF546Q86UE3 SPTSSB-201ENST00000359175 3103 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
ZNF546Q86UE3 ANKRD36BP2-202ENST00000421951 1899 ntTSL 3 BASIC12.36□□□□□ -0.43
ZNF546Q86UE3 FIBCD1-204ENST00000448616 3119 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
ZNF546Q86UE3 KHSRPP1-201ENST00000427983 1768 ntBASIC12.36□□□□□ -0.43
ZNF546Q86UE3 C21orf59-203ENST00000382549 2503 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
ZNF546Q86UE3 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
ZNF546Q86UE3 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
ZNF546Q86UE3 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
ZNF546Q86UE3 AC015712.6-201ENST00000431060 5068 ntTSL 2 BASIC12.36□□□□□ -0.43
ZNF546Q86UE3 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC12.36□□□□□ -0.43
ZNF546Q86UE3 MGAT1-205ENST00000446023 3175 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
ZNF546Q86UE3 FOSB-212ENST00000592811 3089 ntTSL 2 BASIC12.36□□□□□ -0.43
ZNF546Q86UE3 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
ZNF546Q86UE3 AC002056.1-201ENST00000395613 760 ntBASIC12.36□□□□□ -0.43
ZNF546Q86UE3 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
ZNF546Q86UE3 AZGP1P1-201ENST00000411909 902 ntBASIC12.36□□□□□ -0.43
ZNF546Q86UE3 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC12.36□□□□□ -0.43
ZNF546Q86UE3 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC12.36□□□□□ -0.43
ZNF546Q86UE3 NME4-207ENST00000450036 985 ntTSL 3 BASIC12.36□□□□□ -0.43
ZNF546Q86UE3 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC12.36□□□□□ -0.43
ZNF546Q86UE3 PLA2G4B-201ENST00000452633 2985 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
ZNF546Q86UE3 RNA5SP410-201ENST00000516285 106 ntBASIC12.36□□□□□ -0.43
ZNF546Q86UE3 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms