Protein–RNA interactions for Protein: Q7L0R7

RNF44, RING finger protein 44, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF44Q7L0R7 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC14.24□□□□□ -0.13
RNF44Q7L0R7 SMARCA2-208ENST00000382194 5679 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
RNF44Q7L0R7 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RNF44Q7L0R7 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
RNF44Q7L0R7 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RNF44Q7L0R7 NRP2-201ENST00000272849 5909 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
RNF44Q7L0R7 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
RNF44Q7L0R7 ABCG2-201ENST00000237612 4479 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RNF44Q7L0R7 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC14.24□□□□□ -0.13
RNF44Q7L0R7 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RNF44Q7L0R7 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RNF44Q7L0R7 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC14.24□□□□□ -0.13
RNF44Q7L0R7 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RNF44Q7L0R7 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC14.24□□□□□ -0.13
RNF44Q7L0R7 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
RNF44Q7L0R7 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC14.24□□□□□ -0.13
RNF44Q7L0R7 PAPPA-201ENST00000328252 10959 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RNF44Q7L0R7 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RNF44Q7L0R7 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RNF44Q7L0R7 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RNF44Q7L0R7 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RNF44Q7L0R7 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC14.24□□□□□ -0.13
RNF44Q7L0R7 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
RNF44Q7L0R7 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC14.24□□□□□ -0.13
RNF44Q7L0R7 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC14.24□□□□□ -0.13
RNF44Q7L0R7 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC14.24□□□□□ -0.13
RNF44Q7L0R7 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC14.24□□□□□ -0.13
RNF44Q7L0R7 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC14.24□□□□□ -0.13
RNF44Q7L0R7 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC14.24□□□□□ -0.13
RNF44Q7L0R7 DERL2-202ENST00000570848 657 ntTSL 5 BASIC14.24□□□□□ -0.13
RNF44Q7L0R7 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC14.24□□□□□ -0.13
RNF44Q7L0R7 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
RNF44Q7L0R7 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
RNF44Q7L0R7 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
RNF44Q7L0R7 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC14.24□□□□□ -0.13
RNF44Q7L0R7 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RNF44Q7L0R7 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RNF44Q7L0R7 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RNF44Q7L0R7 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
RNF44Q7L0R7 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
RNF44Q7L0R7 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
RNF44Q7L0R7 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RNF44Q7L0R7 NRXN1-207ENST00000404971 7578 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
RNF44Q7L0R7 CICP23-201ENST00000605013 2741 ntBASIC14.24□□□□□ -0.13
RNF44Q7L0R7 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RNF44Q7L0R7 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
RNF44Q7L0R7 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
RNF44Q7L0R7 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
RNF44Q7L0R7 ABCA7-202ENST00000433129 6704 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
RNF44Q7L0R7 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RNF44Q7L0R7 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
RNF44Q7L0R7 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
RNF44Q7L0R7 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
RNF44Q7L0R7 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
RNF44Q7L0R7 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC14.23□□□□□ -0.13
RNF44Q7L0R7 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RNF44Q7L0R7 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
RNF44Q7L0R7 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC14.23□□□□□ -0.13
RNF44Q7L0R7 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC14.23□□□□□ -0.13
RNF44Q7L0R7 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC14.23□□□□□ -0.13
RNF44Q7L0R7 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RNF44Q7L0R7 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RNF44Q7L0R7 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
RNF44Q7L0R7 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC14.23□□□□□ -0.13
RNF44Q7L0R7 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RNF44Q7L0R7 AC007292.2-201ENST00000593524 1812 ntBASIC14.23□□□□□ -0.13
RNF44Q7L0R7 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
RNF44Q7L0R7 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC14.23□□□□□ -0.13
RNF44Q7L0R7 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC14.23□□□□□ -0.13
RNF44Q7L0R7 TISP43-201ENST00000409793 538 ntTSL 4 BASIC14.23□□□□□ -0.13
RNF44Q7L0R7 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC14.23□□□□□ -0.13
RNF44Q7L0R7 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC14.23□□□□□ -0.13
RNF44Q7L0R7 MTX1P1-201ENST00000440904 838 ntBASIC14.23□□□□□ -0.13
RNF44Q7L0R7 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
RNF44Q7L0R7 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC14.23□□□□□ -0.13
RNF44Q7L0R7 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC14.23□□□□□ -0.13
RNF44Q7L0R7 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC14.23□□□□□ -0.13
RNF44Q7L0R7 BX088702.1-201ENST00000610784 235 ntBASIC14.23□□□□□ -0.13
RNF44Q7L0R7 AC244157.2-201ENST00000616239 1006 ntBASIC14.23□□□□□ -0.13
RNF44Q7L0R7 REXO1L6P-201ENST00000603433 1515 ntBASIC14.23□□□□□ -0.13
RNF44Q7L0R7 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC14.23□□□□□ -0.13
RNF44Q7L0R7 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RNF44Q7L0R7 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
RNF44Q7L0R7 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
RNF44Q7L0R7 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC14.23□□□□□ -0.13
RNF44Q7L0R7 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC14.23□□□□□ -0.13
RNF44Q7L0R7 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RNF44Q7L0R7 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
RNF44Q7L0R7 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
RNF44Q7L0R7 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC14.23□□□□□ -0.13
RNF44Q7L0R7 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC14.23□□□□□ -0.13
RNF44Q7L0R7 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RNF44Q7L0R7 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
RNF44Q7L0R7 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
RNF44Q7L0R7 INTS1-201ENST00000404767 6959 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
RNF44Q7L0R7 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC14.22□□□□□ -0.13
RNF44Q7L0R7 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
RNF44Q7L0R7 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC14.22□□□□□ -0.13
RNF44Q7L0R7 AC013726.1-201ENST00000563747 2285 ntBASIC14.22□□□□□ -0.13
RNF44Q7L0R7 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms