Protein–RNA interactions for Protein: Q6UXN2

TREML4, Trem-like transcript 4 protein, humanhuman

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREML4Q6UXN2 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC12.35□□□□□ -0.43
TREML4Q6UXN2 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
TREML4Q6UXN2 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
TREML4Q6UXN2 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
TREML4Q6UXN2 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
TREML4Q6UXN2 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC12.35□□□□□ -0.43
TREML4Q6UXN2 AC084364.1-201ENST00000551967 1556 ntBASIC12.35□□□□□ -0.43
TREML4Q6UXN2 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC12.34□□□□□ -0.43
TREML4Q6UXN2 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC12.34□□□□□ -0.43
TREML4Q6UXN2 REXO1L2P-201ENST00000425429 2069 ntBASIC12.34□□□□□ -0.43
TREML4Q6UXN2 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
TREML4Q6UXN2 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
TREML4Q6UXN2 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
TREML4Q6UXN2 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC12.34□□□□□ -0.43
TREML4Q6UXN2 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
TREML4Q6UXN2 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC12.34□□□□□ -0.43
TREML4Q6UXN2 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC12.34□□□□□ -0.43
TREML4Q6UXN2 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
TREML4Q6UXN2 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
TREML4Q6UXN2 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC12.34□□□□□ -0.43
TREML4Q6UXN2 AC246787.1-201ENST00000392301 627 ntBASIC12.34□□□□□ -0.43
TREML4Q6UXN2 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
TREML4Q6UXN2 LUZP4P1-201ENST00000415420 344 ntBASIC12.34□□□□□ -0.43
TREML4Q6UXN2 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC12.34□□□□□ -0.43
TREML4Q6UXN2 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC12.34□□□□□ -0.43
TREML4Q6UXN2 RPL28-203ENST00000428193 573 ntTSL 2 BASIC12.34□□□□□ -0.43
TREML4Q6UXN2 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC12.34□□□□□ -0.43
TREML4Q6UXN2 AC006033.1-201ENST00000440505 426 ntBASIC12.34□□□□□ -0.43
TREML4Q6UXN2 AC005358.1-201ENST00000445508 1143 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
TREML4Q6UXN2 IGHJ2P-201ENST00000454480 60 ntBASIC12.34□□□□□ -0.43
TREML4Q6UXN2 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC12.34□□□□□ -0.43
TREML4Q6UXN2 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC12.34□□□□□ -0.43
TREML4Q6UXN2 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC12.34□□□□□ -0.43
TREML4Q6UXN2 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC12.34□□□□□ -0.43
TREML4Q6UXN2 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC12.34□□□□□ -0.43
TREML4Q6UXN2 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC12.34□□□□□ -0.43
TREML4Q6UXN2 RIT1-205ENST00000539040 919 ntTSL 2 BASIC12.34□□□□□ -0.43
TREML4Q6UXN2 PTP4A1P2-201ENST00000546033 454 ntBASIC12.34□□□□□ -0.43
TREML4Q6UXN2 AC079316.1-201ENST00000548397 411 ntBASIC12.34□□□□□ -0.43
TREML4Q6UXN2 RPL28-207ENST00000558815 616 ntTSL 2 BASIC12.34□□□□□ -0.43
TREML4Q6UXN2 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC12.34□□□□□ -0.43
TREML4Q6UXN2 AC036164.1-201ENST00000570544 333 ntBASIC12.34□□□□□ -0.43
TREML4Q6UXN2 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC12.34□□□□□ -0.43
TREML4Q6UXN2 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
TREML4Q6UXN2 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
TREML4Q6UXN2 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC12.34□□□□□ -0.43
TREML4Q6UXN2 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC12.34□□□□□ -0.43
TREML4Q6UXN2 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
TREML4Q6UXN2 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC12.34□□□□□ -0.43
TREML4Q6UXN2 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
TREML4Q6UXN2 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
TREML4Q6UXN2 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
TREML4Q6UXN2 BX640514.1-201ENST00000583223 1918 ntBASIC12.34□□□□□ -0.43
TREML4Q6UXN2 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
TREML4Q6UXN2 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC12.34□□□□□ -0.43
TREML4Q6UXN2 POLL-206ENST00000370172 2308 ntTSL 2 BASIC12.34□□□□□ -0.43
TREML4Q6UXN2 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
TREML4Q6UXN2 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
TREML4Q6UXN2 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
TREML4Q6UXN2 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
TREML4Q6UXN2 AC005840.4-201ENST00000541242 2494 ntBASIC12.34□□□□□ -0.43
TREML4Q6UXN2 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC12.34□□□□□ -0.43
TREML4Q6UXN2 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC12.34□□□□□ -0.43
TREML4Q6UXN2 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
TREML4Q6UXN2 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC12.34□□□□□ -0.43
TREML4Q6UXN2 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC12.34□□□□□ -0.43
TREML4Q6UXN2 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC12.34□□□□□ -0.43
TREML4Q6UXN2 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
TREML4Q6UXN2 AL607033.1-201ENST00000623900 1599 ntBASIC12.34□□□□□ -0.43
TREML4Q6UXN2 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC12.34□□□□□ -0.43
TREML4Q6UXN2 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
TREML4Q6UXN2 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
TREML4Q6UXN2 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
TREML4Q6UXN2 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
TREML4Q6UXN2 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
TREML4Q6UXN2 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC12.34□□□□□ -0.43
TREML4Q6UXN2 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC12.34□□□□□ -0.43
TREML4Q6UXN2 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
TREML4Q6UXN2 CNTNAP3P2-201ENST00000617175 3861 ntBASIC12.34□□□□□ -0.43
TREML4Q6UXN2 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
TREML4Q6UXN2 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
TREML4Q6UXN2 KCP-203ENST00000610776 5108 ntTSL 5 BASIC12.33□□□□□ -0.43
TREML4Q6UXN2 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC12.33□□□□□ -0.43
TREML4Q6UXN2 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
TREML4Q6UXN2 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC12.33□□□□□ -0.44
TREML4Q6UXN2 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
TREML4Q6UXN2 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC12.33□□□□□ -0.44
TREML4Q6UXN2 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
TREML4Q6UXN2 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
TREML4Q6UXN2 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
TREML4Q6UXN2 OS9-204ENST00000389146 2091 ntTSL 2 BASIC12.33□□□□□ -0.44
TREML4Q6UXN2 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
TREML4Q6UXN2 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC12.33□□□□□ -0.44
TREML4Q6UXN2 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
TREML4Q6UXN2 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
TREML4Q6UXN2 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
TREML4Q6UXN2 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC12.33□□□□□ -0.44
TREML4Q6UXN2 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
TREML4Q6UXN2 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC12.33□□□□□ -0.44
TREML4Q6UXN2 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 88.8 ms