Protein–RNA interactions for Protein: Q6NT76

HMBOX1, Homeobox-containing protein 1, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1Q6NT76 AC138649.4-201ENST00000612222 287 ntBASIC14.11□□□□□ -0.15
HMBOX1Q6NT76 AL138828.2-201ENST00000615812 383 ntBASIC14.11□□□□□ -0.15
HMBOX1Q6NT76 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC14.11□□□□□ -0.15
HMBOX1Q6NT76 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
HMBOX1Q6NT76 ZNF641-201ENST00000301042 4544 ntTSL 5 BASIC14.11□□□□□ -0.15
HMBOX1Q6NT76 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC14.11□□□□□ -0.15
HMBOX1Q6NT76 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC14.11□□□□□ -0.15
HMBOX1Q6NT76 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC14.11□□□□□ -0.15
HMBOX1Q6NT76 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
HMBOX1Q6NT76 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
HMBOX1Q6NT76 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
HMBOX1Q6NT76 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
HMBOX1Q6NT76 API5-203ENST00000455725 2257 ntTSL 2 BASIC14.11□□□□□ -0.15
HMBOX1Q6NT76 AC011298.1-201ENST00000407635 3398 ntTSL 2 BASIC14.11□□□□□ -0.15
HMBOX1Q6NT76 AL359075.1-201ENST00000476232 2921 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
HMBOX1Q6NT76 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
HMBOX1Q6NT76 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
HMBOX1Q6NT76 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
HMBOX1Q6NT76 RUFY1-202ENST00000393438 2454 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
HMBOX1Q6NT76 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC14.1□□□□□ -0.15
HMBOX1Q6NT76 PCK2-216ENST00000561286 2012 ntTSL 2 BASIC14.1□□□□□ -0.15
HMBOX1Q6NT76 WLS-201ENST00000262348 2748 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
HMBOX1Q6NT76 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
HMBOX1Q6NT76 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC14.1□□□□□ -0.15
HMBOX1Q6NT76 CABP4-201ENST00000325656 2559 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
HMBOX1Q6NT76 ABCC6P1-201ENST00000546162 2943 ntTSL 2 BASIC14.1□□□□□ -0.15
HMBOX1Q6NT76 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
HMBOX1Q6NT76 KCP-203ENST00000610776 5108 ntTSL 5 BASIC14.1□□□□□ -0.15
HMBOX1Q6NT76 VPS9D1-202ENST00000561976 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
HMBOX1Q6NT76 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
HMBOX1Q6NT76 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
HMBOX1Q6NT76 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
HMBOX1Q6NT76 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
HMBOX1Q6NT76 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
HMBOX1Q6NT76 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
HMBOX1Q6NT76 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
HMBOX1Q6NT76 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC14.1□□□□□ -0.15
HMBOX1Q6NT76 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
HMBOX1Q6NT76 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
HMBOX1Q6NT76 MIR6069-201ENST00000620069 79 ntBASIC14.1□□□□□ -0.15
HMBOX1Q6NT76 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC14.1□□□□□ -0.15
HMBOX1Q6NT76 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
HMBOX1Q6NT76 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
HMBOX1Q6NT76 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC14.1□□□□□ -0.15
HMBOX1Q6NT76 TP53I11-222ENST00000616990 3567 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
HMBOX1Q6NT76 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
HMBOX1Q6NT76 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
HMBOX1Q6NT76 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC14.1□□□□□ -0.15
HMBOX1Q6NT76 FBXL19-201ENST00000338343 3965 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
HMBOX1Q6NT76 COL6A1-207ENST00000612273 3251 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
HMBOX1Q6NT76 NR4A1-202ENST00000360284 2589 ntTSL 2 BASIC14.1□□□□□ -0.15
HMBOX1Q6NT76 SLC35G1-201ENST00000371408 3490 ntAPPRIS P3 TSL 2 BASIC14.1□□□□□ -0.15
HMBOX1Q6NT76 AC134312.1-201ENST00000378417 3468 ntTSL 2 BASIC14.1□□□□□ -0.15
HMBOX1Q6NT76 ZFYVE27-202ENST00000357540 2765 ntTSL 2 BASIC14.1□□□□□ -0.15
HMBOX1Q6NT76 ZFYVE27-204ENST00000370610 2769 ntTSL 2 BASIC14.1□□□□□ -0.15
HMBOX1Q6NT76 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
HMBOX1Q6NT76 IFNA6-202ENST00000380210 1544 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
HMBOX1Q6NT76 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC14.1□□□□□ -0.15
HMBOX1Q6NT76 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
HMBOX1Q6NT76 MX1-202ENST00000398598 2850 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
HMBOX1Q6NT76 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC14.09□□□□□ -0.15
HMBOX1Q6NT76 POMT1-201ENST00000341012 2912 ntTSL 2 BASIC14.09□□□□□ -0.15
HMBOX1Q6NT76 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
HMBOX1Q6NT76 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
HMBOX1Q6NT76 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
HMBOX1Q6NT76 DCAF8L2-203ENST00000545306 2013 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
HMBOX1Q6NT76 TTC38-201ENST00000381031 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
HMBOX1Q6NT76 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
HMBOX1Q6NT76 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
HMBOX1Q6NT76 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
HMBOX1Q6NT76 CENPM-205ENST00000404067 905 ntTSL 3 BASIC14.09□□□□□ -0.15
HMBOX1Q6NT76 RPL37AP1-201ENST00000412502 279 ntBASIC14.09□□□□□ -0.15
HMBOX1Q6NT76 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC14.09□□□□□ -0.15
HMBOX1Q6NT76 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
HMBOX1Q6NT76 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
HMBOX1Q6NT76 AC097493.3-201ENST00000509725 367 ntBASIC14.09□□□□□ -0.15
HMBOX1Q6NT76 LY6E-204ENST00000519546 971 ntTSL 2 BASIC14.09□□□□□ -0.15
HMBOX1Q6NT76 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
HMBOX1Q6NT76 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC14.09□□□□□ -0.15
HMBOX1Q6NT76 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC14.09□□□□□ -0.15
HMBOX1Q6NT76 AC027307.3-201ENST00000594262 1100 ntBASIC14.09□□□□□ -0.15
HMBOX1Q6NT76 MIR6752-201ENST00000618442 71 ntBASIC14.09□□□□□ -0.15
HMBOX1Q6NT76 AL390754.1-201ENST00000619088 582 ntBASIC14.09□□□□□ -0.15
HMBOX1Q6NT76 AL358472.5-202ENST00000641448 1267 ntBASIC14.09□□□□□ -0.15
HMBOX1Q6NT76 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
HMBOX1Q6NT76 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
HMBOX1Q6NT76 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC14.09□□□□□ -0.15
HMBOX1Q6NT76 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
HMBOX1Q6NT76 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
HMBOX1Q6NT76 SPHK2-206ENST00000598088 2866 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
HMBOX1Q6NT76 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
HMBOX1Q6NT76 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
HMBOX1Q6NT76 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC14.09□□□□□ -0.15
HMBOX1Q6NT76 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
HMBOX1Q6NT76 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
HMBOX1Q6NT76 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
HMBOX1Q6NT76 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
HMBOX1Q6NT76 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
HMBOX1Q6NT76 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
HMBOX1Q6NT76 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms