Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 ZNF736P1Y-201ENST00000440402 1276 ntBASIC15.71■□□□□ 0.11
VARS2Q5ST30 MSRA-203ENST00000441698 788 ntTSL 2 BASIC15.71■□□□□ 0.11
VARS2Q5ST30 RWDD4P1-201ENST00000488019 565 ntBASIC15.71■□□□□ 0.11
VARS2Q5ST30 RCC2P8-201ENST00000502779 1035 ntBASIC15.71■□□□□ 0.11
VARS2Q5ST30 ZNF419-208ENST00000518999 746 ntTSL 3 BASIC15.71■□□□□ 0.11
VARS2Q5ST30 BHMT-206ENST00000524080 1207 ntTSL 2 BASIC15.71■□□□□ 0.11
VARS2Q5ST30 EIF3M-203ENST00000524896 1207 ntTSL 2 BASIC15.71■□□□□ 0.11
VARS2Q5ST30 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC15.71■□□□□ 0.11
VARS2Q5ST30 AP007216.2-201ENST00000562094 299 ntTSL 3 BASIC15.71■□□□□ 0.11
VARS2Q5ST30 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC15.71■□□□□ 0.11
VARS2Q5ST30 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC15.71■□□□□ 0.11
VARS2Q5ST30 AC011474.2-201ENST00000579268 543 ntTSL 3 BASIC15.71■□□□□ 0.11
VARS2Q5ST30 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC15.71■□□□□ 0.11
VARS2Q5ST30 AC105105.3-201ENST00000585470 646 ntTSL 5 BASIC15.71■□□□□ 0.11
VARS2Q5ST30 AC104365.3-201ENST00000587011 625 ntTSL 5 BASIC15.71■□□□□ 0.11
VARS2Q5ST30 PYY-202ENST00000592796 580 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
VARS2Q5ST30 AC090506.2-201ENST00000624521 419 ntBASIC15.71■□□□□ 0.11
VARS2Q5ST30 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC15.71■□□□□ 0.11
VARS2Q5ST30 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
VARS2Q5ST30 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC15.71■□□□□ 0.11
VARS2Q5ST30 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
VARS2Q5ST30 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC15.71■□□□□ 0.11
VARS2Q5ST30 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
VARS2Q5ST30 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
VARS2Q5ST30 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC15.71■□□□□ 0.11
VARS2Q5ST30 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
VARS2Q5ST30 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC15.71■□□□□ 0.1
VARS2Q5ST30 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC15.71■□□□□ 0.1
VARS2Q5ST30 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
VARS2Q5ST30 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
VARS2Q5ST30 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC15.71■□□□□ 0.1
VARS2Q5ST30 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
VARS2Q5ST30 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC15.71■□□□□ 0.1
VARS2Q5ST30 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
VARS2Q5ST30 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
VARS2Q5ST30 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
VARS2Q5ST30 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
VARS2Q5ST30 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
VARS2Q5ST30 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC15.7■□□□□ 0.1
VARS2Q5ST30 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
VARS2Q5ST30 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
VARS2Q5ST30 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
VARS2Q5ST30 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
VARS2Q5ST30 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC15.7■□□□□ 0.1
VARS2Q5ST30 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
VARS2Q5ST30 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
VARS2Q5ST30 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC15.7■□□□□ 0.1
VARS2Q5ST30 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
VARS2Q5ST30 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
VARS2Q5ST30 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
VARS2Q5ST30 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
VARS2Q5ST30 ARF5-201ENST00000000233 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
VARS2Q5ST30 RAB36-202ENST00000341989 936 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
VARS2Q5ST30 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
VARS2Q5ST30 AL392088.1-201ENST00000428364 670 ntBASIC15.7■□□□□ 0.1
VARS2Q5ST30 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC15.7■□□□□ 0.1
VARS2Q5ST30 AL136361.1-201ENST00000435429 506 ntTSL 3 BASIC15.7■□□□□ 0.1
VARS2Q5ST30 AC091390.4-201ENST00000484974 491 ntTSL 3 BASIC15.7■□□□□ 0.1
VARS2Q5ST30 RN7SL720P-201ENST00000488178 304 ntBASIC15.7■□□□□ 0.1
VARS2Q5ST30 PMP22-206ENST00000494511 872 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
VARS2Q5ST30 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC15.7■□□□□ 0.1
VARS2Q5ST30 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
VARS2Q5ST30 RN7SL574P-201ENST00000581512 297 ntBASIC15.7■□□□□ 0.1
VARS2Q5ST30 FBXL12-212ENST00000592067 879 ntTSL 2 BASIC15.7■□□□□ 0.1
VARS2Q5ST30 Metazoa_SRP.69-201ENST00000615730 281 ntBASIC15.7■□□□□ 0.1
VARS2Q5ST30 LINC01669-205ENST00000624561 713 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
VARS2Q5ST30 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
VARS2Q5ST30 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
VARS2Q5ST30 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC15.7■□□□□ 0.1
VARS2Q5ST30 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
VARS2Q5ST30 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
VARS2Q5ST30 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
VARS2Q5ST30 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC15.7■□□□□ 0.1
VARS2Q5ST30 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
VARS2Q5ST30 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
VARS2Q5ST30 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
VARS2Q5ST30 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
VARS2Q5ST30 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
VARS2Q5ST30 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC15.69■□□□□ 0.1
VARS2Q5ST30 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
VARS2Q5ST30 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
VARS2Q5ST30 MRPL37P1-201ENST00000592451 1337 ntBASIC15.69■□□□□ 0.1
VARS2Q5ST30 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
VARS2Q5ST30 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
VARS2Q5ST30 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
VARS2Q5ST30 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC15.69■□□□□ 0.1
VARS2Q5ST30 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
VARS2Q5ST30 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
VARS2Q5ST30 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
VARS2Q5ST30 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
VARS2Q5ST30 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
VARS2Q5ST30 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC15.69■□□□□ 0.1
VARS2Q5ST30 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC15.69■□□□□ 0.1
VARS2Q5ST30 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
VARS2Q5ST30 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
VARS2Q5ST30 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC15.69■□□□□ 0.1
VARS2Q5ST30 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
VARS2Q5ST30 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC15.69■□□□□ 0.1
VARS2Q5ST30 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
VARS2Q5ST30 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms