Protein–RNA interactions for Protein: Q5M7Z0

RNFT1, E3 ubiquitin-protein ligase RNFT1, humanhuman

Predictions only

Length 435 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNFT1Q5M7Z0 PARN-202ENST00000420015 2360 ntTSL 2 BASIC13.3□□□□□ -0.28
RNFT1Q5M7Z0 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC13.3□□□□□ -0.28
RNFT1Q5M7Z0 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
RNFT1Q5M7Z0 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
RNFT1Q5M7Z0 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
RNFT1Q5M7Z0 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC13.3□□□□□ -0.28
RNFT1Q5M7Z0 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
RNFT1Q5M7Z0 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
RNFT1Q5M7Z0 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
RNFT1Q5M7Z0 AC073316.1-202ENST00000402115 988 ntTSL 5 BASIC13.3□□□□□ -0.28
RNFT1Q5M7Z0 HNRNPA1P27-201ENST00000412087 955 ntBASIC13.3□□□□□ -0.28
RNFT1Q5M7Z0 AC078852.2-201ENST00000504748 527 ntTSL 5 BASIC13.3□□□□□ -0.28
RNFT1Q5M7Z0 AP002336.2-201ENST00000528607 539 ntTSL 5 BASIC13.3□□□□□ -0.28
RNFT1Q5M7Z0 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC13.3□□□□□ -0.28
RNFT1Q5M7Z0 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
RNFT1Q5M7Z0 PSORS1C1-206ENST00000547221 655 ntAPPRIS ALT2 TSL 3 BASIC13.3□□□□□ -0.28
RNFT1Q5M7Z0 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC13.3□□□□□ -0.28
RNFT1Q5M7Z0 PRKXP1-201ENST00000561423 1122 ntBASIC13.3□□□□□ -0.28
RNFT1Q5M7Z0 AC011825.3-201ENST00000583184 565 ntTSL 5 BASIC13.3□□□□□ -0.28
RNFT1Q5M7Z0 AC008763.2-203ENST00000595866 762 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
RNFT1Q5M7Z0 NEAT1-203ENST00000601801 487 ntTSL 4 BASIC13.3□□□□□ -0.28
RNFT1Q5M7Z0 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC13.3□□□□□ -0.28
RNFT1Q5M7Z0 DDX5-235ENST00000630471 473 ntTSL 4 BASIC13.3□□□□□ -0.28
RNFT1Q5M7Z0 MVK-217ENST00000639206 367 ntTSL 5 BASIC13.3□□□□□ -0.28
RNFT1Q5M7Z0 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
RNFT1Q5M7Z0 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC13.3□□□□□ -0.28
RNFT1Q5M7Z0 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
RNFT1Q5M7Z0 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
RNFT1Q5M7Z0 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
RNFT1Q5M7Z0 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
RNFT1Q5M7Z0 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC13.3□□□□□ -0.28
RNFT1Q5M7Z0 DIABLO-201ENST00000267169 1316 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
RNFT1Q5M7Z0 MRPL37P1-201ENST00000592451 1337 ntBASIC13.3□□□□□ -0.28
RNFT1Q5M7Z0 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
RNFT1Q5M7Z0 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC13.3□□□□□ -0.28
RNFT1Q5M7Z0 AL136172.1-201ENST00000598590 1394 ntBASIC13.3□□□□□ -0.28
RNFT1Q5M7Z0 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC13.3□□□□□ -0.28
RNFT1Q5M7Z0 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
RNFT1Q5M7Z0 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
RNFT1Q5M7Z0 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
RNFT1Q5M7Z0 R3HDM2P2-201ENST00000401880 2116 ntBASIC13.3□□□□□ -0.28
RNFT1Q5M7Z0 KIAA1614-AS1-201ENST00000415647 1440 ntTSL 2 BASIC13.3□□□□□ -0.28
RNFT1Q5M7Z0 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
RNFT1Q5M7Z0 LINC00528-201ENST00000600723 2160 ntBASIC13.3□□□□□ -0.28
RNFT1Q5M7Z0 AC006486.2-201ENST00000624246 2199 ntBASIC13.3□□□□□ -0.28
RNFT1Q5M7Z0 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC13.29□□□□□ -0.28
RNFT1Q5M7Z0 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
RNFT1Q5M7Z0 FAH-201ENST00000261755 1471 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
RNFT1Q5M7Z0 F10-203ENST00000409306 1450 ntTSL 3 BASIC13.29□□□□□ -0.28
RNFT1Q5M7Z0 KRT8P21-201ENST00000430398 1491 ntBASIC13.29□□□□□ -0.28
RNFT1Q5M7Z0 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC13.29□□□□□ -0.28
RNFT1Q5M7Z0 MIR600HG-201ENST00000449175 5984 ntBASIC13.29□□□□□ -0.28
RNFT1Q5M7Z0 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
RNFT1Q5M7Z0 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC13.29□□□□□ -0.28
RNFT1Q5M7Z0 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
RNFT1Q5M7Z0 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
RNFT1Q5M7Z0 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
RNFT1Q5M7Z0 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC13.29□□□□□ -0.28
RNFT1Q5M7Z0 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC13.29□□□□□ -0.28
RNFT1Q5M7Z0 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
RNFT1Q5M7Z0 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC13.29□□□□□ -0.28
RNFT1Q5M7Z0 AGAP7P-201ENST00000582299 2062 ntBASIC13.29□□□□□ -0.28
RNFT1Q5M7Z0 AGAP14-201ENST00000624701 2060 ntBASIC13.29□□□□□ -0.28
RNFT1Q5M7Z0 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
RNFT1Q5M7Z0 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
RNFT1Q5M7Z0 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
RNFT1Q5M7Z0 RHOXF1-201ENST00000217999 769 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
RNFT1Q5M7Z0 C6orf52-201ENST00000259983 619 ntAPPRIS P2 TSL 5 BASIC13.29□□□□□ -0.28
RNFT1Q5M7Z0 COMMD4-201ENST00000267935 1067 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
RNFT1Q5M7Z0 COMMD4-202ENST00000338995 722 ntTSL 2 BASIC13.29□□□□□ -0.28
RNFT1Q5M7Z0 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
RNFT1Q5M7Z0 TMEM14B-202ENST00000379542 975 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
RNFT1Q5M7Z0 UFM1-202ENST00000379649 846 ntTSL 4 BASIC13.29□□□□□ -0.28
RNFT1Q5M7Z0 AL391832.2-201ENST00000418557 889 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
RNFT1Q5M7Z0 PSAT1P2-201ENST00000426107 972 ntBASIC13.29□□□□□ -0.28
RNFT1Q5M7Z0 AP1B1P1-201ENST00000432373 827 ntTSL 3 BASIC13.29□□□□□ -0.28
RNFT1Q5M7Z0 LINC01431-201ENST00000442440 514 ntTSL 3 BASIC13.29□□□□□ -0.28
RNFT1Q5M7Z0 LINC02028-203ENST00000443776 453 ntTSL 3 BASIC13.29□□□□□ -0.28
RNFT1Q5M7Z0 AC234782.1-201ENST00000451950 919 ntBASIC13.29□□□□□ -0.28
RNFT1Q5M7Z0 CEP164P1-201ENST00000455142 418 ntBASIC13.29□□□□□ -0.28
RNFT1Q5M7Z0 AC135178.1-201ENST00000458568 537 ntTSL 3 BASIC13.29□□□□□ -0.28
RNFT1Q5M7Z0 AC008443.1-201ENST00000511331 1000 ntTSL 3 BASIC13.29□□□□□ -0.28
RNFT1Q5M7Z0 PGRMC2-206ENST00000512483 1144 ntTSL 5 BASIC13.29□□□□□ -0.28
RNFT1Q5M7Z0 AC242376.1-201ENST00000559033 726 ntBASIC13.29□□□□□ -0.28
RNFT1Q5M7Z0 AC106738.2-201ENST00000559802 557 ntTSL 4 BASIC13.29□□□□□ -0.28
RNFT1Q5M7Z0 ANKRD11-208ENST00000563291 593 ntTSL 5 BASIC13.29□□□□□ -0.28
RNFT1Q5M7Z0 COMMD4-211ENST00000564815 639 ntTSL 3 BASIC13.29□□□□□ -0.28
RNFT1Q5M7Z0 LINC01229-204ENST00000568751 720 ntTSL 3 BASIC13.29□□□□□ -0.28
RNFT1Q5M7Z0 NAT9-211ENST00000580632 799 ntTSL 3 BASIC13.29□□□□□ -0.28
RNFT1Q5M7Z0 AC008743.1-201ENST00000596350 813 ntTSL 4 BASIC13.29□□□□□ -0.28
RNFT1Q5M7Z0 AC008763.1-201ENST00000601797 843 ntTSL 3 BASIC13.29□□□□□ -0.28
RNFT1Q5M7Z0 AC012044.1-201ENST00000603431 297 ntBASIC13.29□□□□□ -0.28
RNFT1Q5M7Z0 SIRT2-219ENST00000613542 1170 ntTSL 5 BASIC13.29□□□□□ -0.28
RNFT1Q5M7Z0 AP001043.1-205ENST00000623098 1033 ntTSL 5 BASIC13.29□□□□□ -0.28
RNFT1Q5M7Z0 AC128714.1-201ENST00000637035 887 ntBASIC13.29□□□□□ -0.28
RNFT1Q5M7Z0 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
RNFT1Q5M7Z0 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
RNFT1Q5M7Z0 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
RNFT1Q5M7Z0 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
RNFT1Q5M7Z0 AGER-201ENST00000375055 1369 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms