Protein–RNA interactions for Protein: Q5GLZ8

HERC4, Probable E3 ubiquitin-protein ligase HERC4, humanhuman

Predicted RBP Predictions only

Length 1,057 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4Q5GLZ8 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HERC4Q5GLZ8 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HERC4Q5GLZ8 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
HERC4Q5GLZ8 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC16.62■□□□□ 0.25
HERC4Q5GLZ8 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HERC4Q5GLZ8 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC16.61■□□□□ 0.25
HERC4Q5GLZ8 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HERC4Q5GLZ8 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HERC4Q5GLZ8 AC003102.2-201ENST00000589195 1469 ntBASIC16.61■□□□□ 0.25
HERC4Q5GLZ8 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HERC4Q5GLZ8 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HERC4Q5GLZ8 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
HERC4Q5GLZ8 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC16.61■□□□□ 0.25
HERC4Q5GLZ8 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HERC4Q5GLZ8 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
HERC4Q5GLZ8 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HERC4Q5GLZ8 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HERC4Q5GLZ8 POM121L8P-201ENST00000417732 1281 ntBASIC16.61■□□□□ 0.25
HERC4Q5GLZ8 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC16.61■□□□□ 0.25
HERC4Q5GLZ8 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC16.61■□□□□ 0.25
HERC4Q5GLZ8 POM121L9P-203ENST00000441984 1285 ntBASIC16.61■□□□□ 0.25
HERC4Q5GLZ8 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
HERC4Q5GLZ8 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC16.61■□□□□ 0.25
HERC4Q5GLZ8 TP53AIP1-205ENST00000531399 806 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
HERC4Q5GLZ8 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC16.61■□□□□ 0.25
HERC4Q5GLZ8 AC025279.2-201ENST00000569730 653 ntBASIC16.61■□□□□ 0.25
HERC4Q5GLZ8 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HERC4Q5GLZ8 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC16.61■□□□□ 0.25
HERC4Q5GLZ8 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC16.61■□□□□ 0.25
HERC4Q5GLZ8 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
HERC4Q5GLZ8 ETV2-208ENST00000621247 941 ntTSL 5 BASIC16.61■□□□□ 0.25
HERC4Q5GLZ8 AC132938.4-201ENST00000623835 848 ntBASIC16.61■□□□□ 0.25
HERC4Q5GLZ8 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC16.61■□□□□ 0.25
HERC4Q5GLZ8 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
HERC4Q5GLZ8 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
HERC4Q5GLZ8 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HERC4Q5GLZ8 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
HERC4Q5GLZ8 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HERC4Q5GLZ8 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HERC4Q5GLZ8 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
HERC4Q5GLZ8 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC16.61■□□□□ 0.25
HERC4Q5GLZ8 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HERC4Q5GLZ8 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC16.61■□□□□ 0.25
HERC4Q5GLZ8 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
HERC4Q5GLZ8 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
HERC4Q5GLZ8 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
HERC4Q5GLZ8 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC16.61■□□□□ 0.25
HERC4Q5GLZ8 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC16.6■□□□□ 0.25
HERC4Q5GLZ8 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
HERC4Q5GLZ8 MX1-218ENST00000619682 1980 ntTSL 5 BASIC16.6■□□□□ 0.25
HERC4Q5GLZ8 AC005912.2-201ENST00000619492 2400 ntBASIC16.6■□□□□ 0.25
HERC4Q5GLZ8 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HERC4Q5GLZ8 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC16.6■□□□□ 0.25
HERC4Q5GLZ8 AC023908.3-201ENST00000564211 3047 ntBASIC16.6■□□□□ 0.25
HERC4Q5GLZ8 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
HERC4Q5GLZ8 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC16.6■□□□□ 0.25
HERC4Q5GLZ8 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC16.6■□□□□ 0.25
HERC4Q5GLZ8 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
HERC4Q5GLZ8 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
HERC4Q5GLZ8 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
HERC4Q5GLZ8 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
HERC4Q5GLZ8 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC16.6■□□□□ 0.25
HERC4Q5GLZ8 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HERC4Q5GLZ8 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HERC4Q5GLZ8 TPM3P8-201ENST00000330554 643 ntBASIC16.6■□□□□ 0.25
HERC4Q5GLZ8 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HERC4Q5GLZ8 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HERC4Q5GLZ8 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC16.6■□□□□ 0.25
HERC4Q5GLZ8 TLE1P1-201ENST00000422965 589 ntBASIC16.6■□□□□ 0.25
HERC4Q5GLZ8 C2orf27AP3-201ENST00000434123 579 ntBASIC16.6■□□□□ 0.25
HERC4Q5GLZ8 BANF1-202ENST00000445560 946 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HERC4Q5GLZ8 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC16.6■□□□□ 0.25
HERC4Q5GLZ8 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC16.6■□□□□ 0.25
HERC4Q5GLZ8 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC16.6■□□□□ 0.25
HERC4Q5GLZ8 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC16.6■□□□□ 0.25
HERC4Q5GLZ8 AL354718.3-201ENST00000616414 581 ntBASIC16.6■□□□□ 0.25
HERC4Q5GLZ8 CR382287.1-201ENST00000623954 586 ntBASIC16.6■□□□□ 0.25
HERC4Q5GLZ8 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC16.6■□□□□ 0.25
HERC4Q5GLZ8 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
HERC4Q5GLZ8 CLUHP2-201ENST00000426660 1303 ntBASIC16.6■□□□□ 0.25
HERC4Q5GLZ8 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
HERC4Q5GLZ8 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HERC4Q5GLZ8 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
HERC4Q5GLZ8 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HERC4Q5GLZ8 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC16.6■□□□□ 0.25
HERC4Q5GLZ8 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HERC4Q5GLZ8 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC16.6■□□□□ 0.25
HERC4Q5GLZ8 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC16.6■□□□□ 0.25
HERC4Q5GLZ8 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HERC4Q5GLZ8 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HERC4Q5GLZ8 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC16.6■□□□□ 0.25
HERC4Q5GLZ8 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HERC4Q5GLZ8 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
HERC4Q5GLZ8 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
HERC4Q5GLZ8 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
HERC4Q5GLZ8 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC16.6■□□□□ 0.25
HERC4Q5GLZ8 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC16.6■□□□□ 0.25
HERC4Q5GLZ8 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HERC4Q5GLZ8 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC16.6■□□□□ 0.25
HERC4Q5GLZ8 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms