Protein–RNA interactions for Protein: Q2M2E3

ODF4, Outer dense fiber protein 4, humanhuman

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ODF4Q2M2E3 DISC1-206ENST00000366637 6848 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
ODF4Q2M2E3 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
ODF4Q2M2E3 BORCS5-202ENST00000314565 4840 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
ODF4Q2M2E3 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
ODF4Q2M2E3 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
ODF4Q2M2E3 ESPN-201ENST00000377828 3531 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
ODF4Q2M2E3 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
ODF4Q2M2E3 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
ODF4Q2M2E3 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC13.21□□□□□ -0.29
ODF4Q2M2E3 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC13.21□□□□□ -0.29
ODF4Q2M2E3 WASHC5-202ENST00000517845 3667 ntTSL 2 BASIC13.21□□□□□ -0.29
ODF4Q2M2E3 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
ODF4Q2M2E3 AC092135.3-201ENST00000624151 1846 ntBASIC13.21□□□□□ -0.29
ODF4Q2M2E3 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
ODF4Q2M2E3 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC13.21□□□□□ -0.29
ODF4Q2M2E3 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
ODF4Q2M2E3 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC13.21□□□□□ -0.29
ODF4Q2M2E3 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
ODF4Q2M2E3 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
ODF4Q2M2E3 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
ODF4Q2M2E3 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC13.21□□□□□ -0.29
ODF4Q2M2E3 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC13.21□□□□□ -0.29
ODF4Q2M2E3 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC13.21□□□□□ -0.29
ODF4Q2M2E3 HLA-K-203ENST00000430151 1046 ntBASIC13.21□□□□□ -0.29
ODF4Q2M2E3 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC13.21□□□□□ -0.29
ODF4Q2M2E3 AC114501.2-201ENST00000439631 535 ntBASIC13.21□□□□□ -0.29
ODF4Q2M2E3 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC13.21□□□□□ -0.29
ODF4Q2M2E3 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC13.21□□□□□ -0.29
ODF4Q2M2E3 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC13.21□□□□□ -0.29
ODF4Q2M2E3 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC13.21□□□□□ -0.29
ODF4Q2M2E3 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
ODF4Q2M2E3 AC135586.1-201ENST00000539323 574 ntBASIC13.21□□□□□ -0.29
ODF4Q2M2E3 CALM1-205ENST00000553542 877 ntTSL 5 BASIC13.21□□□□□ -0.29
ODF4Q2M2E3 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC13.21□□□□□ -0.29
ODF4Q2M2E3 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC13.21□□□□□ -0.29
ODF4Q2M2E3 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC13.21□□□□□ -0.29
ODF4Q2M2E3 AC092337.1-201ENST00000568699 1129 ntBASIC13.21□□□□□ -0.29
ODF4Q2M2E3 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC13.21□□□□□ -0.29
ODF4Q2M2E3 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC13.21□□□□□ -0.29
ODF4Q2M2E3 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
ODF4Q2M2E3 AL158211.3-201ENST00000607385 239 ntBASIC13.21□□□□□ -0.29
ODF4Q2M2E3 AC107373.2-201ENST00000607735 490 ntBASIC13.21□□□□□ -0.29
ODF4Q2M2E3 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC13.21□□□□□ -0.29
ODF4Q2M2E3 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
ODF4Q2M2E3 AC079781.4-201ENST00000641908 219 ntBASIC13.21□□□□□ -0.29
ODF4Q2M2E3 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC13.21□□□□□ -0.29
ODF4Q2M2E3 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
ODF4Q2M2E3 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
ODF4Q2M2E3 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
ODF4Q2M2E3 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC13.21□□□□□ -0.29
ODF4Q2M2E3 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
ODF4Q2M2E3 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
ODF4Q2M2E3 GNAS-213ENST00000371099 3709 ntTSL 5 BASIC13.21□□□□□ -0.29
ODF4Q2M2E3 FAM9C-205ENST00000542843 5858 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
ODF4Q2M2E3 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC13.21□□□□□ -0.3
ODF4Q2M2E3 AC015712.6-201ENST00000431060 5068 ntTSL 2 BASIC13.21□□□□□ -0.3
ODF4Q2M2E3 MTMR3-204ENST00000401950 6018 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
ODF4Q2M2E3 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
ODF4Q2M2E3 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC13.21□□□□□ -0.3
ODF4Q2M2E3 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
ODF4Q2M2E3 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
ODF4Q2M2E3 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
ODF4Q2M2E3 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC13.21□□□□□ -0.3
ODF4Q2M2E3 TDRD5-201ENST00000294848 3525 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
ODF4Q2M2E3 GAB1-202ENST00000262995 7981 ntAPPRIS P4 TSL 1 (best) BASIC13.21□□□□□ -0.3
ODF4Q2M2E3 NUP160-201ENST00000378460 5376 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.3
ODF4Q2M2E3 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
ODF4Q2M2E3 AC125611.4-201ENST00000553259 4166 ntTSL 2 BASIC13.21□□□□□ -0.3
ODF4Q2M2E3 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
ODF4Q2M2E3 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
ODF4Q2M2E3 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC13.2□□□□□ -0.3
ODF4Q2M2E3 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
ODF4Q2M2E3 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
ODF4Q2M2E3 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
ODF4Q2M2E3 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
ODF4Q2M2E3 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC13.2□□□□□ -0.3
ODF4Q2M2E3 STX16-207ENST00000371141 4937 ntAPPRIS P3 TSL 2 BASIC13.2□□□□□ -0.3
ODF4Q2M2E3 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
ODF4Q2M2E3 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
ODF4Q2M2E3 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
ODF4Q2M2E3 OR10AC1-201ENST00000439431 2898 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
ODF4Q2M2E3 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
ODF4Q2M2E3 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
ODF4Q2M2E3 RAPH1-213ENST00000630330 4134 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
ODF4Q2M2E3 BTRC-203ENST00000393441 6084 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
ODF4Q2M2E3 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC13.2□□□□□ -0.3
ODF4Q2M2E3 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
ODF4Q2M2E3 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
ODF4Q2M2E3 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
ODF4Q2M2E3 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC13.2□□□□□ -0.3
ODF4Q2M2E3 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
ODF4Q2M2E3 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
ODF4Q2M2E3 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
ODF4Q2M2E3 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
ODF4Q2M2E3 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC13.2□□□□□ -0.3
ODF4Q2M2E3 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC13.2□□□□□ -0.3
ODF4Q2M2E3 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC13.2□□□□□ -0.3
ODF4Q2M2E3 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC13.2□□□□□ -0.3
ODF4Q2M2E3 AC241585.1-201ENST00000433527 519 ntBASIC13.2□□□□□ -0.3
ODF4Q2M2E3 OTUD4-201ENST00000447906 3829 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 62 ms