Protein–RNA interactions for Protein: Q08722

CD47, Leukocyte surface antigen CD47, humanhuman

Predictions only

Length 323 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD47Q08722 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC13.85□□□□□ -0.19
CD47Q08722 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
CD47Q08722 RPL28-205ENST00000558131 444 ntTSL 5 BASIC13.85□□□□□ -0.19
CD47Q08722 AC044860.1-202ENST00000559481 777 ntBASIC13.85□□□□□ -0.19
CD47Q08722 TBCB-211ENST00000589996 724 ntTSL 3 BASIC13.85□□□□□ -0.19
CD47Q08722 AL390754.1-201ENST00000619088 582 ntBASIC13.85□□□□□ -0.19
CD47Q08722 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CD47Q08722 USH1C-201ENST00000005226 2700 ntAPPRIS P3 TSL 5 BASIC13.85□□□□□ -0.19
CD47Q08722 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CD47Q08722 ANKMY1-206ENST00000401804 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
CD47Q08722 BRSK2-202ENST00000382179 3576 ntTSL 2 BASIC13.85□□□□□ -0.19
CD47Q08722 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC13.85□□□□□ -0.19
CD47Q08722 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
CD47Q08722 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CD47Q08722 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CD47Q08722 SSTR3-201ENST00000610913 4100 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CD47Q08722 SPHK2-201ENST00000245222 2963 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
CD47Q08722 ACP7-201ENST00000331256 2966 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
CD47Q08722 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CD47Q08722 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
CD47Q08722 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
CD47Q08722 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CD47Q08722 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC13.85□□□□□ -0.19
CD47Q08722 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC13.85□□□□□ -0.19
CD47Q08722 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CD47Q08722 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
CD47Q08722 PML-202ENST00000268059 3029 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
CD47Q08722 ATG9A-204ENST00000409422 2512 ntTSL 5 BASIC13.85□□□□□ -0.19
CD47Q08722 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CD47Q08722 AC083964.2-201ENST00000623988 2396 ntBASIC13.85□□□□□ -0.19
CD47Q08722 PATL2-208ENST00000560780 1863 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
CD47Q08722 ADAM17-204ENST00000618923 1881 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CD47Q08722 RPS6KA1-213ENST00000526792 2596 ntTSL 5 BASIC13.84□□□□□ -0.19
CD47Q08722 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CD47Q08722 PNRC2-201ENST00000334351 2416 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CD47Q08722 TMPRSS3-203ENST00000398405 2754 ntAPPRIS ALT1 TSL 5 BASIC13.84□□□□□ -0.19
CD47Q08722 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CD47Q08722 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CD47Q08722 ABLIM2-213ENST00000514025 2974 ntTSL 2 BASIC13.84□□□□□ -0.19
CD47Q08722 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC13.84□□□□□ -0.19
CD47Q08722 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CD47Q08722 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC13.84□□□□□ -0.19
CD47Q08722 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CD47Q08722 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CD47Q08722 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
CD47Q08722 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CD47Q08722 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CD47Q08722 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC13.84□□□□□ -0.19
CD47Q08722 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC13.84□□□□□ -0.19
CD47Q08722 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
CD47Q08722 TIMM17BP1-201ENST00000545713 516 ntBASIC13.84□□□□□ -0.19
CD47Q08722 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC13.84□□□□□ -0.19
CD47Q08722 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC13.84□□□□□ -0.19
CD47Q08722 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC13.84□□□□□ -0.19
CD47Q08722 ADCY3-202ENST00000405392 4397 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CD47Q08722 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
CD47Q08722 SUOX-208ENST00000548274 2352 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
CD47Q08722 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC13.84□□□□□ -0.19
CD47Q08722 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
CD47Q08722 DAZL-201ENST00000250863 3104 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CD47Q08722 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC13.84□□□□□ -0.19
CD47Q08722 AC020910.6-201ENST00000623084 1459 ntBASIC13.84□□□□□ -0.19
CD47Q08722 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CD47Q08722 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
CD47Q08722 L3MBTL1-206ENST00000427442 3157 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
CD47Q08722 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CD47Q08722 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CD47Q08722 SPOCD1-201ENST00000257100 2472 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
CD47Q08722 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC13.84□□□□□ -0.19
CD47Q08722 TCAM1P-207ENST00000485295 1537 ntBASIC13.84□□□□□ -0.19
CD47Q08722 PCDHA11-201ENST00000398640 6115 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
CD47Q08722 CCDC57-203ENST00000392343 2896 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
CD47Q08722 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CD47Q08722 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
CD47Q08722 RGS9-210ENST00000635833 2308 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
CD47Q08722 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
CD47Q08722 RAPH1-202ENST00000319170 9808 ntAPPRIS P4 TSL 1 (best) BASIC13.83□□□□□ -0.19
CD47Q08722 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC13.83□□□□□ -0.19
CD47Q08722 AP003555.1-202ENST00000511013 1755 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
CD47Q08722 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
CD47Q08722 WDR24-201ENST00000248142 2763 ntTSL 5 BASIC13.83□□□□□ -0.19
CD47Q08722 MAN2B2-202ENST00000504248 2968 ntTSL 2 BASIC13.83□□□□□ -0.19
CD47Q08722 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CD47Q08722 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
CD47Q08722 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC13.83□□□□□ -0.2
CD47Q08722 FFAR4-202ENST00000371483 3653 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CD47Q08722 TRMT2B-203ENST00000372939 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
CD47Q08722 AKAP12-204ENST00000402676 8432 ntAPPRIS P4 TSL 5 BASIC13.83□□□□□ -0.2
CD47Q08722 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
CD47Q08722 LINC01792-201ENST00000452787 2050 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CD47Q08722 DNAJB6-201ENST00000262177 2527 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
CD47Q08722 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC13.83□□□□□ -0.2
CD47Q08722 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
CD47Q08722 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC13.83□□□□□ -0.2
CD47Q08722 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CD47Q08722 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CD47Q08722 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
CD47Q08722 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC13.83□□□□□ -0.2
CD47Q08722 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC13.83□□□□□ -0.2
CD47Q08722 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC13.83□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms