Protein–RNA interactions for Protein: Q00535

CDK5, Cyclin-dependent-like kinase 5, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5Q00535 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC13.39□□□□□ -0.27
CDK5Q00535 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
CDK5Q00535 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CDK5Q00535 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC13.39□□□□□ -0.27
CDK5Q00535 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC13.39□□□□□ -0.27
CDK5Q00535 KLF2P2-201ENST00000416807 1039 ntBASIC13.39□□□□□ -0.27
CDK5Q00535 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
CDK5Q00535 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC13.39□□□□□ -0.27
CDK5Q00535 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC13.39□□□□□ -0.27
CDK5Q00535 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
CDK5Q00535 GCOM2-201ENST00000509133 1104 ntBASIC13.39□□□□□ -0.27
CDK5Q00535 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC13.39□□□□□ -0.27
CDK5Q00535 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC13.39□□□□□ -0.27
CDK5Q00535 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC13.39□□□□□ -0.27
CDK5Q00535 VPS18-202ENST00000558474 873 ntTSL 3 BASIC13.39□□□□□ -0.27
CDK5Q00535 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC13.39□□□□□ -0.27
CDK5Q00535 LSM12-202ENST00000585388 942 ntTSL 3 BASIC13.39□□□□□ -0.27
CDK5Q00535 AC004790.1-201ENST00000612686 536 ntBASIC13.39□□□□□ -0.27
CDK5Q00535 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
CDK5Q00535 FLJ40288-201ENST00000332558 1998 ntTSL 2 BASIC13.39□□□□□ -0.27
CDK5Q00535 CALML3-201ENST00000315238 2763 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
CDK5Q00535 SFXN3-201ENST00000224807 3089 ntTSL 5 BASIC13.39□□□□□ -0.27
CDK5Q00535 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
CDK5Q00535 ZNF609-202ENST00000416172 3863 ntTSL 2 BASIC13.39□□□□□ -0.27
CDK5Q00535 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
CDK5Q00535 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
CDK5Q00535 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CDK5Q00535 LRSAM1-204ENST00000373324 3044 ntTSL 2 BASIC13.39□□□□□ -0.27
CDK5Q00535 CICP8-201ENST00000455800 2813 ntBASIC13.39□□□□□ -0.27
CDK5Q00535 DSN1-203ENST00000373750 2233 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
CDK5Q00535 C19orf66-202ENST00000397881 2140 ntAPPRIS ALT2 TSL 2 BASIC13.39□□□□□ -0.27
CDK5Q00535 ARHGEF9-230ENST00000637178 2145 ntTSL 5 BASIC13.39□□□□□ -0.27
CDK5Q00535 MAP3K3-203ENST00000577395 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CDK5Q00535 INTS4P2-202ENST00000614726 2019 ntBASIC13.39□□□□□ -0.27
CDK5Q00535 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
CDK5Q00535 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
CDK5Q00535 C7orf57-204ENST00000435376 1925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
CDK5Q00535 C7orf57-206ENST00000539619 1927 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
CDK5Q00535 POTEM-201ENST00000547889 1817 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CDK5Q00535 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC13.39□□□□□ -0.27
CDK5Q00535 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CDK5Q00535 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CDK5Q00535 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
CDK5Q00535 BRSK2-202ENST00000382179 3576 ntTSL 2 BASIC13.38□□□□□ -0.27
CDK5Q00535 KCNN2-206ENST00000512097 3076 ntAPPRIS P2 TSL 5 BASIC13.38□□□□□ -0.27
CDK5Q00535 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CDK5Q00535 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CDK5Q00535 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CDK5Q00535 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
CDK5Q00535 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
CDK5Q00535 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
CDK5Q00535 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
CDK5Q00535 TPM3P9-201ENST00000424846 2920 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CDK5Q00535 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
CDK5Q00535 ZCCHC7-209ENST00000534928 2828 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CDK5Q00535 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
CDK5Q00535 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CDK5Q00535 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CDK5Q00535 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CDK5Q00535 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
CDK5Q00535 SHPK-201ENST00000225519 3838 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CDK5Q00535 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CDK5Q00535 MIR943-201ENST00000401286 94 ntBASIC13.38□□□□□ -0.27
CDK5Q00535 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC13.38□□□□□ -0.27
CDK5Q00535 AC134915.1-201ENST00000426461 574 ntBASIC13.38□□□□□ -0.27
CDK5Q00535 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC13.38□□□□□ -0.27
CDK5Q00535 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC13.38□□□□□ -0.27
CDK5Q00535 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC13.38□□□□□ -0.27
CDK5Q00535 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC13.38□□□□□ -0.27
CDK5Q00535 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CDK5Q00535 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC13.38□□□□□ -0.27
CDK5Q00535 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC13.38□□□□□ -0.27
CDK5Q00535 AP001582.1-201ENST00000525856 295 ntBASIC13.38□□□□□ -0.27
CDK5Q00535 TPRX2P-201ENST00000535362 881 ntBASIC13.38□□□□□ -0.27
CDK5Q00535 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC13.38□□□□□ -0.27
CDK5Q00535 RRP7BP-205ENST00000566851 833 ntBASIC13.38□□□□□ -0.27
CDK5Q00535 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC13.38□□□□□ -0.27
CDK5Q00535 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC13.38□□□□□ -0.27
CDK5Q00535 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
CDK5Q00535 AL390955.2-201ENST00000603032 514 ntBASIC13.38□□□□□ -0.27
CDK5Q00535 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CDK5Q00535 MEAF6-203ENST00000373074 2005 ntTSL 2 BASIC13.38□□□□□ -0.27
CDK5Q00535 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC13.38□□□□□ -0.27
CDK5Q00535 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC13.38□□□□□ -0.27
CDK5Q00535 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
CDK5Q00535 CR382287.2-201ENST00000623370 1942 ntTSL 2 BASIC13.38□□□□□ -0.27
CDK5Q00535 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
CDK5Q00535 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CDK5Q00535 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
CDK5Q00535 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC13.38□□□□□ -0.27
CDK5Q00535 STC1-202ENST00000524323 1748 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CDK5Q00535 KCNAB2-219ENST00000602612 2396 ntTSL 2 BASIC13.38□□□□□ -0.27
CDK5Q00535 FAM213A-203ENST00000372187 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CDK5Q00535 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
CDK5Q00535 THUMPD3-AS1-202ENST00000468186 3253 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CDK5Q00535 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC13.38□□□□□ -0.27
CDK5Q00535 FOS-202ENST00000535987 1402 ntTSL 2 BASIC13.38□□□□□ -0.27
CDK5Q00535 GALC-206ENST00000544807 2528 ntTSL 2 BASIC13.38□□□□□ -0.27
CDK5Q00535 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CDK5Q00535 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 56.9 ms