Protein–RNA interactions for Protein: P63208

SKP1, S-phase kinase-associated protein 1, humanhuman

Predictions only

Length 163 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1P63208 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SKP1P63208 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SKP1P63208 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SKP1P63208 RN7SKP230-201ENST00000365642 335 ntBASIC14.11□□□□□ -0.15
SKP1P63208 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SKP1P63208 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
SKP1P63208 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
SKP1P63208 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
SKP1P63208 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SKP1P63208 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC14.11□□□□□ -0.15
SKP1P63208 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
SKP1P63208 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC14.11□□□□□ -0.15
SKP1P63208 RGS5-214ENST00000429865 754 ntTSL 3 BASIC14.11□□□□□ -0.15
SKP1P63208 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
SKP1P63208 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC14.11□□□□□ -0.15
SKP1P63208 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC14.11□□□□□ -0.15
SKP1P63208 Z93015.1-201ENST00000451718 390 ntBASIC14.11□□□□□ -0.15
SKP1P63208 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC14.11□□□□□ -0.15
SKP1P63208 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC14.11□□□□□ -0.15
SKP1P63208 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC14.11□□□□□ -0.15
SKP1P63208 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
SKP1P63208 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SKP1P63208 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
SKP1P63208 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC14.11□□□□□ -0.15
SKP1P63208 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC14.11□□□□□ -0.15
SKP1P63208 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC14.11□□□□□ -0.15
SKP1P63208 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
SKP1P63208 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC14.11□□□□□ -0.15
SKP1P63208 DIO1-215ENST00000610607 796 ntTSL 5 BASIC14.11□□□□□ -0.15
SKP1P63208 AC244157.2-201ENST00000616239 1006 ntBASIC14.11□□□□□ -0.15
SKP1P63208 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC14.11□□□□□ -0.15
SKP1P63208 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
SKP1P63208 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SKP1P63208 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC14.11□□□□□ -0.15
SKP1P63208 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SKP1P63208 NACC2-202ENST00000371753 6802 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SKP1P63208 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
SKP1P63208 KRT8P4-201ENST00000509735 1454 ntBASIC14.11□□□□□ -0.15
SKP1P63208 TUBB1P2-201ENST00000422712 1306 ntBASIC14.11□□□□□ -0.15
SKP1P63208 TUBB1P1-201ENST00000503144 1300 ntBASIC14.11□□□□□ -0.15
SKP1P63208 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
SKP1P63208 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SKP1P63208 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC14.11□□□□□ -0.15
SKP1P63208 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
SKP1P63208 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC14.11□□□□□ -0.15
SKP1P63208 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC14.1□□□□□ -0.15
SKP1P63208 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SKP1P63208 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
SKP1P63208 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC14.1□□□□□ -0.15
SKP1P63208 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SKP1P63208 NUP133-201ENST00000261396 5207 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SKP1P63208 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SKP1P63208 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
SKP1P63208 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC14.1□□□□□ -0.15
SKP1P63208 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
SKP1P63208 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC14.1□□□□□ -0.15
SKP1P63208 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
SKP1P63208 DENND3-211ENST00000519811 5482 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
SKP1P63208 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
SKP1P63208 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC14.1□□□□□ -0.15
SKP1P63208 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC14.1□□□□□ -0.15
SKP1P63208 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
SKP1P63208 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
SKP1P63208 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SKP1P63208 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
SKP1P63208 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
SKP1P63208 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SKP1P63208 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SKP1P63208 KIAA1161-201ENST00000297625 6398 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SKP1P63208 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
SKP1P63208 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
SKP1P63208 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC14.1□□□□□ -0.15
SKP1P63208 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC14.1□□□□□ -0.15
SKP1P63208 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC14.1□□□□□ -0.15
SKP1P63208 AC119751.2-201ENST00000504529 210 ntBASIC14.1□□□□□ -0.15
SKP1P63208 MFF-223ENST00000524634 647 ntTSL 2 BASIC14.1□□□□□ -0.15
SKP1P63208 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
SKP1P63208 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
SKP1P63208 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
SKP1P63208 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC14.1□□□□□ -0.15
SKP1P63208 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC14.1□□□□□ -0.15
SKP1P63208 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SKP1P63208 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SKP1P63208 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SKP1P63208 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC14.1□□□□□ -0.15
SKP1P63208 SLC35D1-201ENST00000235345 6162 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SKP1P63208 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
SKP1P63208 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
SKP1P63208 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SKP1P63208 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC14.1□□□□□ -0.15
SKP1P63208 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC14.1□□□□□ -0.15
SKP1P63208 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
SKP1P63208 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SKP1P63208 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
SKP1P63208 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SKP1P63208 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
SKP1P63208 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC14.1□□□□□ -0.15
SKP1P63208 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
SKP1P63208 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
SKP1P63208 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC14.09□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms