Protein–RNA interactions for Protein: P60953

CDC42, Cell division control protein 42 homolog, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42P60953 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC13.62□□□□□ -0.23
CDC42P60953 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC13.62□□□□□ -0.23
CDC42P60953 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC13.62□□□□□ -0.23
CDC42P60953 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC13.62□□□□□ -0.23
CDC42P60953 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC13.62□□□□□ -0.23
CDC42P60953 RAB34-224ENST00000636513 888 ntTSL 5 BASIC13.62□□□□□ -0.23
CDC42P60953 PBRM1-204ENST00000394830 5071 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
CDC42P60953 MYD88-201ENST00000396334 2850 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
CDC42P60953 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC13.62□□□□□ -0.23
CDC42P60953 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CDC42P60953 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC13.62□□□□□ -0.23
CDC42P60953 TOLLIP-202ENST00000317204 3617 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CDC42P60953 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
CDC42P60953 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC13.62□□□□□ -0.23
CDC42P60953 LAMB2-201ENST00000305544 5643 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CDC42P60953 BICDL2-204ENST00000573514 3519 ntTSL 2 BASIC13.62□□□□□ -0.23
CDC42P60953 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC13.62□□□□□ -0.23
CDC42P60953 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC13.62□□□□□ -0.23
CDC42P60953 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
CDC42P60953 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CDC42P60953 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CDC42P60953 ARAP1-202ENST00000359373 5767 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
CDC42P60953 AC023794.5-201ENST00000564380 2157 ntBASIC13.62□□□□□ -0.23
CDC42P60953 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CDC42P60953 PAM-201ENST00000304400 3156 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
CDC42P60953 FLI1-201ENST00000281428 4151 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CDC42P60953 FRMD4B-201ENST00000398540 5060 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CDC42P60953 CASC10-201ENST00000377113 3801 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CDC42P60953 NR3C1-201ENST00000231509 3556 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CDC42P60953 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CDC42P60953 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC13.62□□□□□ -0.23
CDC42P60953 MAGI2-218ENST00000630991 2349 ntTSL 2 BASIC13.62□□□□□ -0.23
CDC42P60953 TRPV4-202ENST00000418703 3247 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CDC42P60953 RER1-207ENST00000488353 2469 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CDC42P60953 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC13.62□□□□□ -0.23
CDC42P60953 PPP2R5E-201ENST00000337537 6659 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
CDC42P60953 MIR9-3HG-201ENST00000536780 4778 ntTSL 3 BASIC13.62□□□□□ -0.23
CDC42P60953 LDLRAD4-203ENST00000399848 8633 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CDC42P60953 FAM156A-221ENST00000622447 3757 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
CDC42P60953 PLD2-201ENST00000263088 3503 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CDC42P60953 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CDC42P60953 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CDC42P60953 AC099521.3-201ENST00000624251 2938 ntBASIC13.61□□□□□ -0.23
CDC42P60953 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CDC42P60953 BRWD1-201ENST00000333229 10141 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CDC42P60953 MEAF6-203ENST00000373074 2005 ntTSL 2 BASIC13.61□□□□□ -0.23
CDC42P60953 NSD2-204ENST00000382891 7534 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
CDC42P60953 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
CDC42P60953 DUSP28-202ENST00000405954 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CDC42P60953 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CDC42P60953 ALDH7A1-201ENST00000409134 4964 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
CDC42P60953 SLC46A1-208ENST00000618626 5363 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CDC42P60953 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CDC42P60953 CLUAP1-202ENST00000571025 5126 ntTSL 2 BASIC13.61□□□□□ -0.23
CDC42P60953 TACR2-201ENST00000373306 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CDC42P60953 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CDC42P60953 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CDC42P60953 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC13.61□□□□□ -0.23
CDC42P60953 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CDC42P60953 RPL30-202ENST00000396070 440 ntTSL 2 BASIC13.61□□□□□ -0.23
CDC42P60953 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CDC42P60953 AL022342.1-201ENST00000400363 863 ntBASIC13.61□□□□□ -0.23
CDC42P60953 AC004945.1-201ENST00000416738 983 ntBASIC13.61□□□□□ -0.23
CDC42P60953 AC004832.2-201ENST00000426397 482 ntBASIC13.61□□□□□ -0.23
CDC42P60953 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC13.61□□□□□ -0.23
CDC42P60953 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CDC42P60953 SATB1-217ENST00000493952 626 ntTSL 3 BASIC13.61□□□□□ -0.23
CDC42P60953 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC13.61□□□□□ -0.23
CDC42P60953 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
CDC42P60953 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CDC42P60953 AL513210.1-201ENST00000629608 234 ntBASIC13.61□□□□□ -0.23
CDC42P60953 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC13.61□□□□□ -0.23
CDC42P60953 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CDC42P60953 KRT8P14-201ENST00000414254 1442 ntBASIC13.61□□□□□ -0.23
CDC42P60953 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC13.61□□□□□ -0.23
CDC42P60953 MYADML-201ENST00000474610 2147 ntBASIC13.61□□□□□ -0.23
CDC42P60953 ZCCHC7-209ENST00000534928 2828 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CDC42P60953 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CDC42P60953 PLCD1-204ENST00000463876 2963 ntAPPRIS ALT1 TSL 2 BASIC13.61□□□□□ -0.23
CDC42P60953 GPC6-201ENST00000377047 6467 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CDC42P60953 AC093525.8-201ENST00000624099 1342 ntBASIC13.61□□□□□ -0.23
CDC42P60953 MIR193BHG-211ENST00000641433 5365 ntBASIC13.61□□□□□ -0.23
CDC42P60953 NCOR2-208ENST00000429285 8475 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
CDC42P60953 LRRC8C-201ENST00000370454 7218 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CDC42P60953 FAM171B-201ENST00000304698 5826 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CDC42P60953 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
CDC42P60953 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
CDC42P60953 AL158070.2-201ENST00000623713 1621 ntBASIC13.61□□□□□ -0.23
CDC42P60953 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CDC42P60953 AP003555.1-202ENST00000511013 1755 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CDC42P60953 CALML3-201ENST00000315238 2763 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
CDC42P60953 COBL-205ENST00000441453 3785 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CDC42P60953 YTHDF3-209ENST00000617200 5076 ntTSL 5 BASIC13.6□□□□□ -0.23
CDC42P60953 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
CDC42P60953 AC108002.1-201ENST00000520572 5684 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CDC42P60953 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC13.6□□□□□ -0.23
CDC42P60953 AC027612.1-201ENST00000445234 2395 ntBASIC13.6□□□□□ -0.23
CDC42P60953 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC13.6□□□□□ -0.23
CDC42P60953 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC13.6□□□□□ -0.23
CDC42P60953 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 65.7 ms