Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC13.89□□□□□ -0.19
CDH12P55289 REEP4-207ENST00000523293 913 ntTSL 3 BASIC13.89□□□□□ -0.19
CDH12P55289 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC13.89□□□□□ -0.19
CDH12P55289 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC13.89□□□□□ -0.19
CDH12P55289 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC13.89□□□□□ -0.19
CDH12P55289 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC13.89□□□□□ -0.19
CDH12P55289 DUT-210ENST00000559935 569 ntTSL 3 BASIC13.89□□□□□ -0.19
CDH12P55289 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC13.89□□□□□ -0.19
CDH12P55289 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC13.89□□□□□ -0.19
CDH12P55289 AC005498.2-205ENST00000593218 784 ntBASIC13.89□□□□□ -0.19
CDH12P55289 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC13.89□□□□□ -0.19
CDH12P55289 DDX31-204ENST00000372159 4577 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
CDH12P55289 FAM120C-201ENST00000328235 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
CDH12P55289 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
CDH12P55289 LRRC8D-201ENST00000337338 3950 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
CDH12P55289 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
CDH12P55289 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CDH12P55289 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
CDH12P55289 TMEM132C-201ENST00000435159 4947 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
CDH12P55289 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
CDH12P55289 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CDH12P55289 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CDH12P55289 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CDH12P55289 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CDH12P55289 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
CDH12P55289 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CDH12P55289 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CDH12P55289 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC13.88□□□□□ -0.19
CDH12P55289 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CDH12P55289 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC13.88□□□□□ -0.19
CDH12P55289 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC13.88□□□□□ -0.19
CDH12P55289 ITGB3-201ENST00000559488 3995 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CDH12P55289 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC13.88□□□□□ -0.19
CDH12P55289 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC13.88□□□□□ -0.19
CDH12P55289 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CDH12P55289 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CDH12P55289 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC13.88□□□□□ -0.19
CDH12P55289 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
CDH12P55289 GNAQP1-201ENST00000444815 1067 ntBASIC13.88□□□□□ -0.19
CDH12P55289 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC13.88□□□□□ -0.19
CDH12P55289 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC13.88□□□□□ -0.19
CDH12P55289 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC13.88□□□□□ -0.19
CDH12P55289 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC13.88□□□□□ -0.19
CDH12P55289 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CDH12P55289 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC13.88□□□□□ -0.19
CDH12P55289 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC13.88□□□□□ -0.19
CDH12P55289 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC13.88□□□□□ -0.19
CDH12P55289 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC13.88□□□□□ -0.19
CDH12P55289 AC006538.3-201ENST00000612495 578 ntBASIC13.88□□□□□ -0.19
CDH12P55289 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC13.88□□□□□ -0.19
CDH12P55289 AC012617.1-204ENST00000586340 2305 ntBASIC13.88□□□□□ -0.19
CDH12P55289 WASHC2C-201ENST00000336378 4669 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
CDH12P55289 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CDH12P55289 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
CDH12P55289 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CDH12P55289 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC13.88□□□□□ -0.19
CDH12P55289 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC13.88□□□□□ -0.19
CDH12P55289 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC13.88□□□□□ -0.19
CDH12P55289 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CDH12P55289 PIK3R5-219ENST00000616147 4377 ntTSL 5 BASIC13.88□□□□□ -0.19
CDH12P55289 PHTF1-203ENST00000369600 3075 ntTSL 5 BASIC13.88□□□□□ -0.19
CDH12P55289 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC13.88□□□□□ -0.19
CDH12P55289 KRT8P22-201ENST00000562317 1415 ntBASIC13.88□□□□□ -0.19
CDH12P55289 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC13.88□□□□□ -0.19
CDH12P55289 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC13.88□□□□□ -0.19
CDH12P55289 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
CDH12P55289 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CDH12P55289 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CDH12P55289 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CDH12P55289 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
CDH12P55289 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CDH12P55289 ADAM11-201ENST00000200557 4571 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CDH12P55289 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
CDH12P55289 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CDH12P55289 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
CDH12P55289 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CDH12P55289 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC13.87□□□□□ -0.19
CDH12P55289 TNFAIP8L1-201ENST00000327473 3814 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CDH12P55289 TNFAIP8L1-202ENST00000536716 3845 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
CDH12P55289 KIF21B-201ENST00000332129 9897 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CDH12P55289 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CDH12P55289 GORASP1-201ENST00000319283 3722 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CDH12P55289 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CDH12P55289 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
CDH12P55289 ADK-205ENST00000539909 1866 ntTSL 2 BASIC13.87□□□□□ -0.19
CDH12P55289 SBF1-202ENST00000380817 8008 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
CDH12P55289 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC13.87□□□□□ -0.19
CDH12P55289 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC13.87□□□□□ -0.19
CDH12P55289 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CDH12P55289 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
CDH12P55289 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CDH12P55289 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CDH12P55289 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
CDH12P55289 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
CDH12P55289 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC13.87□□□□□ -0.19
CDH12P55289 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CDH12P55289 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CDH12P55289 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC13.87□□□□□ -0.19
CDH12P55289 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
CDH12P55289 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 55.9 ms