Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 KLF2P1-201ENST00000447438 1042 ntBASIC15.1■□□□□ 0.01
CDH4P55283 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CDH4P55283 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC15.1■□□□□ 0.01
CDH4P55283 RNMTL1P1-201ENST00000454103 560 ntBASIC15.1■□□□□ 0.01
CDH4P55283 SERPINA13P-202ENST00000478994 924 ntBASIC15.1■□□□□ 0.01
CDH4P55283 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC15.1■□□□□ 0.01
CDH4P55283 AP001258.2-201ENST00000529891 490 ntBASIC15.1■□□□□ 0.01
CDH4P55283 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC15.1■□□□□ 0.01
CDH4P55283 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CDH4P55283 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CDH4P55283 Z98259.2-201ENST00000641583 609 ntBASIC15.1■□□□□ 0.01
CDH4P55283 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
CDH4P55283 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC15.1■□□□□ 0.01
CDH4P55283 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC15.1■□□□□ 0.01
CDH4P55283 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
CDH4P55283 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CDH4P55283 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
CDH4P55283 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC15.1■□□□□ 0.01
CDH4P55283 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
CDH4P55283 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC15.1■□□□□ 0.01
CDH4P55283 MIR600HG-201ENST00000449175 5984 ntBASIC15.1■□□□□ 0.01
CDH4P55283 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC15.1■□□□□ 0.01
CDH4P55283 AGGF1P1-201ENST00000509500 2073 ntBASIC15.1■□□□□ 0.01
CDH4P55283 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC15.1■□□□□ 0.01
CDH4P55283 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CDH4P55283 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC15.1■□□□□ 0.01
CDH4P55283 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC15.1■□□□□ 0.01
CDH4P55283 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC15.1■□□□□ 0.01
CDH4P55283 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CDH4P55283 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
CDH4P55283 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CDH4P55283 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
CDH4P55283 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
CDH4P55283 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
CDH4P55283 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CDH4P55283 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC15.09■□□□□ 0.01
CDH4P55283 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CDH4P55283 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
CDH4P55283 AL390755.1-201ENST00000623716 2027 ntBASIC15.09■□□□□ 0.01
CDH4P55283 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CDH4P55283 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
CDH4P55283 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
CDH4P55283 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
CDH4P55283 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC15.09■□□□□ 0.01
CDH4P55283 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
CDH4P55283 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC15.09■□□□□ 0.01
CDH4P55283 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CDH4P55283 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
CDH4P55283 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
CDH4P55283 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CDH4P55283 R3HDM2P2-201ENST00000401880 2116 ntBASIC15.09■□□□□ 0.01
CDH4P55283 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC15.09■□□□□ 0.01
CDH4P55283 AL645933.1-201ENST00000440087 609 ntBASIC15.09■□□□□ 0.01
CDH4P55283 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC15.09■□□□□ 0.01
CDH4P55283 OARD1-212ENST00000482515 832 ntTSL 2 BASIC15.09■□□□□ 0.01
CDH4P55283 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC15.09■□□□□ 0.01
CDH4P55283 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
CDH4P55283 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC15.09■□□□□ 0.01
CDH4P55283 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC15.09■□□□□ 0.01
CDH4P55283 NKG7-204ENST00000595217 816 ntTSL 2 BASIC15.09■□□□□ 0.01
CDH4P55283 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC15.09■□□□□ 0.01
CDH4P55283 AC006504.5-208ENST00000588784 2401 ntBASIC15.09■□□□□ 0.01
CDH4P55283 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC15.09■□□□□ 0.01
CDH4P55283 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CDH4P55283 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC15.09■□□□□ 0.01
CDH4P55283 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
CDH4P55283 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
CDH4P55283 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
CDH4P55283 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CDH4P55283 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CDH4P55283 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CDH4P55283 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CDH4P55283 AC020907.1-201ENST00000616460 1350 ntBASIC15.09■□□□□ 0.01
CDH4P55283 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
CDH4P55283 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
CDH4P55283 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CDH4P55283 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
CDH4P55283 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC15.08■□□□□ 0.01
CDH4P55283 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC15.08■□□□□ 0.01
CDH4P55283 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0.01
CDH4P55283 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
CDH4P55283 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
CDH4P55283 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CDH4P55283 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC15.08■□□□□ 0
CDH4P55283 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC15.08■□□□□ 0
CDH4P55283 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CDH4P55283 HNRNPA1P32-201ENST00000396326 963 ntBASIC15.08■□□□□ 0
CDH4P55283 MIR1247-201ENST00000408206 136 ntBASIC15.08■□□□□ 0
CDH4P55283 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC15.08■□□□□ 0
CDH4P55283 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC15.08■□□□□ 0
CDH4P55283 TPT1P11-201ENST00000458482 498 ntBASIC15.08■□□□□ 0
CDH4P55283 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC15.08■□□□□ 0
CDH4P55283 AC022447.6-201ENST00000515522 438 ntBASIC15.08■□□□□ 0
CDH4P55283 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC15.08■□□□□ 0
CDH4P55283 RN7SL163P-201ENST00000583100 276 ntBASIC15.08■□□□□ 0
CDH4P55283 AP000346.4-201ENST00000614827 381 ntBASIC15.08■□□□□ 0
CDH4P55283 RPL35-206ENST00000629845 340 ntTSL 5 BASIC15.08■□□□□ 0
CDH4P55283 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC15.08■□□□□ 0
CDH4P55283 AC004899.1-201ENST00000424687 1714 ntBASIC15.08■□□□□ 0
CDH4P55283 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC15.08■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms