Protein–RNA interactions for Protein: P54252

ATXN3, Ataxin-3, humanhuman

Predicted RBP Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3P54252 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
ATXN3P54252 CMC2-214ENST00000565925 640 ntTSL 5 BASIC15.28■□□□□ 0.04
ATXN3P54252 KC6-205ENST00000599934 556 ntTSL 4 BASIC15.28■□□□□ 0.04
ATXN3P54252 DIO1-215ENST00000610607 796 ntTSL 5 BASIC15.28■□□□□ 0.04
ATXN3P54252 BX539320.1-201ENST00000623759 877 ntBASIC15.28■□□□□ 0.04
ATXN3P54252 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC15.28■□□□□ 0.04
ATXN3P54252 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ATXN3P54252 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
ATXN3P54252 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC15.28■□□□□ 0.04
ATXN3P54252 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
ATXN3P54252 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC15.28■□□□□ 0.04
ATXN3P54252 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ATXN3P54252 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ATXN3P54252 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
ATXN3P54252 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ATXN3P54252 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
ATXN3P54252 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
ATXN3P54252 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
ATXN3P54252 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
ATXN3P54252 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ATXN3P54252 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
ATXN3P54252 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
ATXN3P54252 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
ATXN3P54252 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
ATXN3P54252 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
ATXN3P54252 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC15.27■□□□□ 0.04
ATXN3P54252 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
ATXN3P54252 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
ATXN3P54252 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
ATXN3P54252 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
ATXN3P54252 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
ATXN3P54252 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
ATXN3P54252 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
ATXN3P54252 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC15.27■□□□□ 0.04
ATXN3P54252 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
ATXN3P54252 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
ATXN3P54252 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
ATXN3P54252 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
ATXN3P54252 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
ATXN3P54252 TPM3P8-201ENST00000330554 643 ntBASIC15.27■□□□□ 0.04
ATXN3P54252 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
ATXN3P54252 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
ATXN3P54252 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
ATXN3P54252 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC15.27■□□□□ 0.04
ATXN3P54252 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC15.27■□□□□ 0.04
ATXN3P54252 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC15.27■□□□□ 0.04
ATXN3P54252 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
ATXN3P54252 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
ATXN3P54252 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC15.27■□□□□ 0.04
ATXN3P54252 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC15.27■□□□□ 0.04
ATXN3P54252 MIR6727-201ENST00000620702 65 ntBASIC15.27■□□□□ 0.04
ATXN3P54252 AC006453.4-201ENST00000636949 1252 ntBASIC15.27■□□□□ 0.04
ATXN3P54252 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
ATXN3P54252 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
ATXN3P54252 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
ATXN3P54252 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
ATXN3P54252 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
ATXN3P54252 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
ATXN3P54252 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
ATXN3P54252 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
ATXN3P54252 AC013726.1-201ENST00000563747 2285 ntBASIC15.27■□□□□ 0.03
ATXN3P54252 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
ATXN3P54252 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
ATXN3P54252 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
ATXN3P54252 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC15.27■□□□□ 0.03
ATXN3P54252 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
ATXN3P54252 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
ATXN3P54252 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
ATXN3P54252 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
ATXN3P54252 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
ATXN3P54252 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
ATXN3P54252 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC15.26■□□□□ 0.03
ATXN3P54252 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
ATXN3P54252 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
ATXN3P54252 TK1-203ENST00000588734 1681 ntTSL 2 BASIC15.26■□□□□ 0.03
ATXN3P54252 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
ATXN3P54252 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
ATXN3P54252 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC15.26■□□□□ 0.03
ATXN3P54252 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
ATXN3P54252 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
ATXN3P54252 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
ATXN3P54252 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
ATXN3P54252 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC15.26■□□□□ 0.03
ATXN3P54252 AL133267.1-201ENST00000398220 340 ntBASIC15.26■□□□□ 0.03
ATXN3P54252 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC15.26■□□□□ 0.03
ATXN3P54252 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC15.26■□□□□ 0.03
ATXN3P54252 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC15.26■□□□□ 0.03
ATXN3P54252 AL590640.2-201ENST00000457038 527 ntBASIC15.26■□□□□ 0.03
ATXN3P54252 RPSAP36-202ENST00000494591 1261 ntBASIC15.26■□□□□ 0.03
ATXN3P54252 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC15.26■□□□□ 0.03
ATXN3P54252 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC15.26■□□□□ 0.03
ATXN3P54252 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
ATXN3P54252 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC15.26■□□□□ 0.03
ATXN3P54252 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
ATXN3P54252 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC15.26■□□□□ 0.03
ATXN3P54252 AC016629.1-201ENST00000596579 586 ntBASIC15.26■□□□□ 0.03
ATXN3P54252 Z84492.1-201ENST00000606589 408 ntAPPRIS P1 TSL 3 BASIC15.26■□□□□ 0.03
ATXN3P54252 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC15.26■□□□□ 0.03
ATXN3P54252 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
ATXN3P54252 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC15.26■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms