Protein–RNA interactions for Protein: P51793

CLCN4, H(+)/Cl(-) exchange transporter 4, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4P51793 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
CLCN4P51793 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CLCN4P51793 ENO3-202ENST00000518175 1448 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CLCN4P51793 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC15.49■□□□□ 0.07
CLCN4P51793 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CLCN4P51793 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC15.49■□□□□ 0.07
CLCN4P51793 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CLCN4P51793 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CLCN4P51793 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
CLCN4P51793 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC15.48■□□□□ 0.07
CLCN4P51793 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
CLCN4P51793 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
CLCN4P51793 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
CLCN4P51793 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CLCN4P51793 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CLCN4P51793 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
CLCN4P51793 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC15.48■□□□□ 0.07
CLCN4P51793 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CLCN4P51793 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
CLCN4P51793 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CLCN4P51793 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
CLCN4P51793 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
CLCN4P51793 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC15.48■□□□□ 0.07
CLCN4P51793 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CLCN4P51793 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CLCN4P51793 C3orf33-205ENST00000534941 1804 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CLCN4P51793 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CLCN4P51793 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CLCN4P51793 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
CLCN4P51793 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
CLCN4P51793 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CLCN4P51793 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
CLCN4P51793 LAIR2-201ENST00000301202 699 ntAPPRIS P4 TSL 1 (best) BASIC15.48■□□□□ 0.07
CLCN4P51793 ANK1-203ENST00000314214 1185 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CLCN4P51793 FMR1NB-201ENST00000370467 1021 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CLCN4P51793 AL512430.1-201ENST00000392575 860 ntBASIC15.48■□□□□ 0.07
CLCN4P51793 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC15.48■□□□□ 0.07
CLCN4P51793 HDDC2-202ENST00000398153 918 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CLCN4P51793 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC15.48■□□□□ 0.07
CLCN4P51793 SAP30L-203ENST00000440364 792 ntTSL 3 BASIC15.48■□□□□ 0.07
CLCN4P51793 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CLCN4P51793 AC130709.1-201ENST00000484779 1212 ntBASIC15.48■□□□□ 0.07
CLCN4P51793 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC15.48■□□□□ 0.07
CLCN4P51793 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC15.48■□□□□ 0.07
CLCN4P51793 LINC02417-201ENST00000542449 515 ntTSL 2 BASIC15.48■□□□□ 0.07
CLCN4P51793 FKBP11-212ENST00000552878 1052 ntAPPRIS ALT2 TSL 2 BASIC15.48■□□□□ 0.07
CLCN4P51793 LINC01629-201ENST00000553613 581 ntTSL 4 BASIC15.48■□□□□ 0.07
CLCN4P51793 PIN1-207ENST00000588695 648 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
CLCN4P51793 TPGS2-209ENST00000589049 1102 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CLCN4P51793 AC018755.3-203ENST00000597710 411 ntTSL 3 BASIC15.48■□□□□ 0.07
CLCN4P51793 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC15.48■□□□□ 0.07
CLCN4P51793 C15orf59-AS1-202ENST00000615095 1224 ntTSL 5 BASIC15.48■□□□□ 0.07
CLCN4P51793 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC15.48■□□□□ 0.07
CLCN4P51793 DNAJC17-212ENST00000627802 428 ntTSL 4 BASIC15.48■□□□□ 0.07
CLCN4P51793 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CLCN4P51793 ASCC2-201ENST00000307790 2793 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CLCN4P51793 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CLCN4P51793 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CLCN4P51793 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CLCN4P51793 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
CLCN4P51793 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
CLCN4P51793 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
CLCN4P51793 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC15.48■□□□□ 0.07
CLCN4P51793 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
CLCN4P51793 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC15.48■□□□□ 0.07
CLCN4P51793 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
CLCN4P51793 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
CLCN4P51793 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC15.48■□□□□ 0.07
CLCN4P51793 AC063926.3-201ENST00000624734 5658 ntBASIC15.48■□□□□ 0.07
CLCN4P51793 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CLCN4P51793 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CLCN4P51793 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CLCN4P51793 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CLCN4P51793 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CLCN4P51793 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC15.47■□□□□ 0.07
CLCN4P51793 MYB-242ENST00000618728 3545 ntTSL 5 BASIC15.47■□□□□ 0.07
CLCN4P51793 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC15.47■□□□□ 0.07
CLCN4P51793 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CLCN4P51793 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
CLCN4P51793 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CLCN4P51793 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
CLCN4P51793 CASK-202ENST00000378158 3848 ntTSL 5 BASIC15.47■□□□□ 0.07
CLCN4P51793 MIR557-201ENST00000385239 98 ntBASIC15.47■□□□□ 0.07
CLCN4P51793 AL583805.1-201ENST00000391389 531 ntBASIC15.47■□□□□ 0.07
CLCN4P51793 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC15.47■□□□□ 0.07
CLCN4P51793 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CLCN4P51793 BANF1P3-201ENST00000412556 261 ntBASIC15.47■□□□□ 0.07
CLCN4P51793 PFN2-202ENST00000423691 911 ntTSL 2 BASIC15.47■□□□□ 0.07
CLCN4P51793 AL137856.1-201ENST00000429398 773 ntTSL 3 BASIC15.47■□□□□ 0.07
CLCN4P51793 TSPY25P-201ENST00000429463 745 ntBASIC15.47■□□□□ 0.07
CLCN4P51793 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC15.47■□□□□ 0.07
CLCN4P51793 ENDOV-229ENST00000523999 864 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CLCN4P51793 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
CLCN4P51793 LINC01584-201ENST00000562495 676 ntTSL 5 BASIC15.47■□□□□ 0.07
CLCN4P51793 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CLCN4P51793 AC040162.4-201ENST00000574912 1185 ntAPPRIS P1 TSL 3 BASIC15.47■□□□□ 0.07
CLCN4P51793 AC007881.3-201ENST00000608897 607 ntBASIC15.47■□□□□ 0.07
CLCN4P51793 FXYD6-FXYD2-202ENST00000614497 634 ntAPPRIS P1 TSL 3 BASIC15.47■□□□□ 0.07
CLCN4P51793 AP001065.2-201ENST00000617205 644 ntBASIC15.47■□□□□ 0.07
CLCN4P51793 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 93.9 ms