Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RNF144AP50876 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
RNF144AP50876 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC13.88□□□□□ -0.19
RNF144AP50876 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC13.88□□□□□ -0.19
RNF144AP50876 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC13.88□□□□□ -0.19
RNF144AP50876 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
RNF144AP50876 OSBPL1A-201ENST00000319481 4195 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RNF144AP50876 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RNF144AP50876 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
RNF144AP50876 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC13.88□□□□□ -0.19
RNF144AP50876 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
RNF144AP50876 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
RNF144AP50876 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RNF144AP50876 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC13.88□□□□□ -0.19
RNF144AP50876 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC13.88□□□□□ -0.19
RNF144AP50876 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RNF144AP50876 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
RNF144AP50876 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
RNF144AP50876 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
RNF144AP50876 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
RNF144AP50876 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
RNF144AP50876 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC13.87□□□□□ -0.19
RNF144AP50876 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC13.87□□□□□ -0.19
RNF144AP50876 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
RNF144AP50876 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
RNF144AP50876 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
RNF144AP50876 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
RNF144AP50876 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
RNF144AP50876 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
RNF144AP50876 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
RNF144AP50876 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
RNF144AP50876 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
RNF144AP50876 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
RNF144AP50876 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
RNF144AP50876 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
RNF144AP50876 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
RNF144AP50876 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
RNF144AP50876 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC13.87□□□□□ -0.19
RNF144AP50876 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC13.87□□□□□ -0.19
RNF144AP50876 PGF-202ENST00000405431 666 ntTSL 5 BASIC13.87□□□□□ -0.19
RNF144AP50876 RPL28-203ENST00000428193 573 ntTSL 2 BASIC13.87□□□□□ -0.19
RNF144AP50876 RPL28-204ENST00000431533 590 ntTSL 2 BASIC13.87□□□□□ -0.19
RNF144AP50876 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC13.87□□□□□ -0.19
RNF144AP50876 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC13.87□□□□□ -0.19
RNF144AP50876 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC13.87□□□□□ -0.19
RNF144AP50876 FO681548.1-201ENST00000455617 1132 ntBASIC13.87□□□□□ -0.19
RNF144AP50876 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
RNF144AP50876 AC022616.1-201ENST00000518688 554 ntBASIC13.87□□□□□ -0.19
RNF144AP50876 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC13.87□□□□□ -0.19
RNF144AP50876 RPL28-207ENST00000558815 616 ntTSL 2 BASIC13.87□□□□□ -0.19
RNF144AP50876 AP001063.1-201ENST00000568332 529 ntBASIC13.87□□□□□ -0.19
RNF144AP50876 RPS15-202ENST00000585665 467 ntTSL 3 BASIC13.87□□□□□ -0.19
RNF144AP50876 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC13.87□□□□□ -0.19
RNF144AP50876 AP001542.1-201ENST00000591314 200 ntBASIC13.87□□□□□ -0.19
RNF144AP50876 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC13.87□□□□□ -0.19
RNF144AP50876 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC13.87□□□□□ -0.19
RNF144AP50876 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
RNF144AP50876 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC13.87□□□□□ -0.19
RNF144AP50876 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC13.87□□□□□ -0.19
RNF144AP50876 PRSS30P-206ENST00000641773 873 ntBASIC13.87□□□□□ -0.19
RNF144AP50876 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC13.87□□□□□ -0.19
RNF144AP50876 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
RNF144AP50876 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
RNF144AP50876 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
RNF144AP50876 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
RNF144AP50876 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC13.87□□□□□ -0.19
RNF144AP50876 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC13.87□□□□□ -0.19
RNF144AP50876 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
RNF144AP50876 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC13.87□□□□□ -0.19
RNF144AP50876 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
RNF144AP50876 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
RNF144AP50876 RPL23A-204ENST00000422514 1562 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
RNF144AP50876 AC134312.5-201ENST00000568031 1313 ntBASIC13.87□□□□□ -0.19
RNF144AP50876 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC13.87□□□□□ -0.19
RNF144AP50876 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC13.87□□□□□ -0.19
RNF144AP50876 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
RNF144AP50876 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
RNF144AP50876 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
RNF144AP50876 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
RNF144AP50876 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC13.86□□□□□ -0.19
RNF144AP50876 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC13.86□□□□□ -0.19
RNF144AP50876 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
RNF144AP50876 AC113367.3-201ENST00000508316 1912 ntBASIC13.86□□□□□ -0.19
RNF144AP50876 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
RNF144AP50876 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC13.86□□□□□ -0.19
RNF144AP50876 AC018665.1-201ENST00000622927 1362 ntBASIC13.86□□□□□ -0.19
RNF144AP50876 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
RNF144AP50876 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC13.86□□□□□ -0.19
RNF144AP50876 PLIN4-201ENST00000301286 6353 ntAPPRIS P2 TSL 5 BASIC13.86□□□□□ -0.19
RNF144AP50876 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
RNF144AP50876 EMILIN1-201ENST00000380320 3943 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
RNF144AP50876 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
RNF144AP50876 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
RNF144AP50876 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
RNF144AP50876 RPS15-201ENST00000233609 534 ntTSL 2 BASIC13.86□□□□□ -0.19
RNF144AP50876 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
RNF144AP50876 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC13.86□□□□□ -0.19
RNF144AP50876 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC13.86□□□□□ -0.19
RNF144AP50876 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC13.86□□□□□ -0.19
RNF144AP50876 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC13.86□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 65.2 ms