Protein–RNA interactions for Protein: P48065

SLC6A12, Sodium- and chloride-dependent betaine transporter, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A12P48065 WNT11-204ENST00000621122 789 ntTSL 5 BASIC14.26□□□□□ -0.13
SLC6A12P48065 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
SLC6A12P48065 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC14.26□□□□□ -0.13
SLC6A12P48065 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
SLC6A12P48065 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC14.26□□□□□ -0.13
SLC6A12P48065 HPD-204ENST00000543163 1709 ntTSL 5 BASIC14.26□□□□□ -0.13
SLC6A12P48065 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SLC6A12P48065 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SLC6A12P48065 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SLC6A12P48065 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
SLC6A12P48065 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SLC6A12P48065 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SLC6A12P48065 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
SLC6A12P48065 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SLC6A12P48065 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC14.25□□□□□ -0.13
SLC6A12P48065 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SLC6A12P48065 KRT8P4-201ENST00000509735 1454 ntBASIC14.25□□□□□ -0.13
SLC6A12P48065 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC14.25□□□□□ -0.13
SLC6A12P48065 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
SLC6A12P48065 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SLC6A12P48065 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SLC6A12P48065 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SLC6A12P48065 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC14.25□□□□□ -0.13
SLC6A12P48065 AC009093.10-201ENST00000641956 1442 ntBASIC14.25□□□□□ -0.13
SLC6A12P48065 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SLC6A12P48065 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC14.25□□□□□ -0.13
SLC6A12P48065 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SLC6A12P48065 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
SLC6A12P48065 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SLC6A12P48065 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SLC6A12P48065 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC14.25□□□□□ -0.13
SLC6A12P48065 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
SLC6A12P48065 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SLC6A12P48065 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
SLC6A12P48065 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SLC6A12P48065 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SLC6A12P48065 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
SLC6A12P48065 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC14.25□□□□□ -0.13
SLC6A12P48065 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SLC6A12P48065 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC14.25□□□□□ -0.13
SLC6A12P48065 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SLC6A12P48065 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SLC6A12P48065 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SLC6A12P48065 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SLC6A12P48065 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC14.25□□□□□ -0.13
SLC6A12P48065 PTPA-215ENST00000432124 567 ntTSL 4 BASIC14.25□□□□□ -0.13
SLC6A12P48065 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SLC6A12P48065 AL355994.2-201ENST00000447882 704 ntBASIC14.25□□□□□ -0.13
SLC6A12P48065 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC14.25□□□□□ -0.13
SLC6A12P48065 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC14.25□□□□□ -0.13
SLC6A12P48065 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC14.25□□□□□ -0.13
SLC6A12P48065 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC14.25□□□□□ -0.13
SLC6A12P48065 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC14.25□□□□□ -0.13
SLC6A12P48065 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SLC6A12P48065 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC14.25□□□□□ -0.13
SLC6A12P48065 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC14.25□□□□□ -0.13
SLC6A12P48065 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC14.25□□□□□ -0.13
SLC6A12P48065 PPY2P-201ENST00000582808 702 ntBASIC14.25□□□□□ -0.13
SLC6A12P48065 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SLC6A12P48065 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC14.25□□□□□ -0.13
SLC6A12P48065 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC14.25□□□□□ -0.13
SLC6A12P48065 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
SLC6A12P48065 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC14.25□□□□□ -0.13
SLC6A12P48065 AL162274.1-201ENST00000617191 1098 ntBASIC14.25□□□□□ -0.13
SLC6A12P48065 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
SLC6A12P48065 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SLC6A12P48065 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC14.25□□□□□ -0.13
SLC6A12P48065 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC14.25□□□□□ -0.13
SLC6A12P48065 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SLC6A12P48065 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SLC6A12P48065 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SLC6A12P48065 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC14.25□□□□□ -0.13
SLC6A12P48065 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SLC6A12P48065 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
SLC6A12P48065 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
SLC6A12P48065 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC14.25□□□□□ -0.13
SLC6A12P48065 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC14.25□□□□□ -0.13
SLC6A12P48065 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SLC6A12P48065 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SLC6A12P48065 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
SLC6A12P48065 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SLC6A12P48065 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SLC6A12P48065 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
SLC6A12P48065 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
SLC6A12P48065 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC14.24□□□□□ -0.13
SLC6A12P48065 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC14.24□□□□□ -0.13
SLC6A12P48065 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SLC6A12P48065 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SLC6A12P48065 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SLC6A12P48065 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC14.24□□□□□ -0.13
SLC6A12P48065 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SLC6A12P48065 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SLC6A12P48065 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SLC6A12P48065 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
SLC6A12P48065 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SLC6A12P48065 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC14.24□□□□□ -0.13
SLC6A12P48065 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
SLC6A12P48065 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC14.24□□□□□ -0.13
SLC6A12P48065 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SLC6A12P48065 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 71.3 ms