Protein–RNA interactions for Protein: P40818

USP8, Ubiquitin carboxyl-terminal hydrolase 8, humanhuman

Predictions only

Length 1,118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP8P40818 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
USP8P40818 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
USP8P40818 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
USP8P40818 ADAMTS5-201ENST00000284987 9056 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
USP8P40818 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC16.27■□□□□ 0.2
USP8P40818 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
USP8P40818 CAND2-201ENST00000295989 4429 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
USP8P40818 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
USP8P40818 CLCN6-201ENST00000312413 5631 ntTSL 2 BASIC16.27■□□□□ 0.2
USP8P40818 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
USP8P40818 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
USP8P40818 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC16.27■□□□□ 0.2
USP8P40818 CALY-202ENST00000368555 783 ntTSL 2 BASIC16.27■□□□□ 0.2
USP8P40818 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC16.27■□□□□ 0.2
USP8P40818 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
USP8P40818 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
USP8P40818 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
USP8P40818 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC16.27■□□□□ 0.2
USP8P40818 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC16.27■□□□□ 0.2
USP8P40818 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC16.27■□□□□ 0.2
USP8P40818 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.2
USP8P40818 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
USP8P40818 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
USP8P40818 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
USP8P40818 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
USP8P40818 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC16.27■□□□□ 0.2
USP8P40818 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
USP8P40818 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
USP8P40818 WLS-201ENST00000262348 2748 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
USP8P40818 ACKR3-201ENST00000272928 2203 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
USP8P40818 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
USP8P40818 SLC25A29-208ENST00000554912 5169 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
USP8P40818 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
USP8P40818 ABR-228ENST00000574437 3196 ntTSL 5 BASIC16.27■□□□□ 0.19
USP8P40818 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC16.27■□□□□ 0.19
USP8P40818 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
USP8P40818 ISLR-202ENST00000395118 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
USP8P40818 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC16.27■□□□□ 0.19
USP8P40818 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
USP8P40818 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.19
USP8P40818 USP19-208ENST00000453664 4719 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.19
USP8P40818 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC16.27■□□□□ 0.19
USP8P40818 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC16.27■□□□□ 0.19
USP8P40818 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC16.27■□□□□ 0.19
USP8P40818 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
USP8P40818 SEPT7-202ENST00000399034 4399 ntTSL 5 BASIC16.26■□□□□ 0.19
USP8P40818 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
USP8P40818 MORC4-202ENST00000355610 3834 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
USP8P40818 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
USP8P40818 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
USP8P40818 DCHS1-201ENST00000299441 10765 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
USP8P40818 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
USP8P40818 ADAM15-206ENST00000368412 2804 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
USP8P40818 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC16.26■□□□□ 0.19
USP8P40818 COL6A3-202ENST00000347401 8625 ntTSL 5 BASIC16.26■□□□□ 0.19
USP8P40818 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
USP8P40818 COL6A3-209ENST00000472056 8628 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
USP8P40818 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
USP8P40818 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
USP8P40818 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
USP8P40818 AL139094.1-201ENST00000405549 1188 ntBASIC16.26■□□□□ 0.19
USP8P40818 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC16.26■□□□□ 0.19
USP8P40818 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC16.26■□□□□ 0.19
USP8P40818 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
USP8P40818 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC16.26■□□□□ 0.19
USP8P40818 YTHDF3-AS1-201ENST00000603538 718 ntBASIC16.26■□□□□ 0.19
USP8P40818 CU634019.7-201ENST00000624153 1185 ntBASIC16.26■□□□□ 0.19
USP8P40818 FP236241.2-201ENST00000624906 1185 ntBASIC16.26■□□□□ 0.19
USP8P40818 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
USP8P40818 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC16.26■□□□□ 0.19
USP8P40818 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC16.26■□□□□ 0.19
USP8P40818 PCDHB16-201ENST00000609684 5001 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
USP8P40818 NXPH1-201ENST00000405863 2921 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
USP8P40818 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
USP8P40818 SELENON-202ENST00000361547 4334 ntAPPRIS P4 TSL 1 (best) BASIC16.26■□□□□ 0.19
USP8P40818 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC16.26■□□□□ 0.19
USP8P40818 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC16.26■□□□□ 0.19
USP8P40818 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
USP8P40818 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
USP8P40818 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
USP8P40818 FSTL4-201ENST00000265342 5419 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
USP8P40818 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
USP8P40818 KIRREL1-204ENST00000368173 7519 ntTSL 2 BASIC16.26■□□□□ 0.19
USP8P40818 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
USP8P40818 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
USP8P40818 ZNF772-204ENST00000427512 5130 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
USP8P40818 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
USP8P40818 HNRNPA1P48-201ENST00000562726 1377 ntBASIC16.26■□□□□ 0.19
USP8P40818 POM121-205ENST00000627934 5480 ntAPPRIS P3 TSL 5 BASIC16.25■□□□□ 0.19
USP8P40818 TCAF2-202ENST00000411935 2906 ntTSL 5 BASIC16.25■□□□□ 0.19
USP8P40818 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
USP8P40818 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC16.25■□□□□ 0.19
USP8P40818 ZNF395-201ENST00000344423 4808 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
USP8P40818 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
USP8P40818 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
USP8P40818 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC16.25■□□□□ 0.19
USP8P40818 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC16.25■□□□□ 0.19
USP8P40818 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC16.25■□□□□ 0.19
USP8P40818 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC16.25■□□□□ 0.19
USP8P40818 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 54.1 ms