Protein–RNA interactions for Protein: P40198

CEACAM3, Carcinoembryonic antigen-related cell adhesion molecule 3, humanhuman

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM3P40198 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
CEACAM3P40198 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CEACAM3P40198 MESTP3-201ENST00000503460 968 ntBASIC12.17□□□□□ -0.46
CEACAM3P40198 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC12.17□□□□□ -0.46
CEACAM3P40198 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC12.17□□□□□ -0.46
CEACAM3P40198 AC023310.1-201ENST00000554836 735 ntBASIC12.17□□□□□ -0.46
CEACAM3P40198 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC12.17□□□□□ -0.46
CEACAM3P40198 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC12.17□□□□□ -0.46
CEACAM3P40198 GNRHR2-203ENST00000581100 1187 ntBASIC12.17□□□□□ -0.46
CEACAM3P40198 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC12.17□□□□□ -0.46
CEACAM3P40198 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC12.17□□□□□ -0.46
CEACAM3P40198 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
CEACAM3P40198 AC138466.3-201ENST00000619983 221 ntBASIC12.17□□□□□ -0.46
CEACAM3P40198 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC12.17□□□□□ -0.46
CEACAM3P40198 AC006453.4-201ENST00000636949 1252 ntBASIC12.17□□□□□ -0.46
CEACAM3P40198 SLC6A5-202ENST00000525748 7084 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CEACAM3P40198 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
CEACAM3P40198 SLC35E2B-205ENST00000617444 6283 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CEACAM3P40198 ZEB2-204ENST00000409487 5361 ntAPPRIS P2 TSL 5 BASIC12.17□□□□□ -0.46
CEACAM3P40198 HNRNPUL1-204ENST00000392006 3555 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
CEACAM3P40198 FGD5P1-202ENST00000614866 2498 ntBASIC12.17□□□□□ -0.46
CEACAM3P40198 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CEACAM3P40198 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC12.17□□□□□ -0.46
CEACAM3P40198 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC12.17□□□□□ -0.46
CEACAM3P40198 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CEACAM3P40198 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
CEACAM3P40198 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CEACAM3P40198 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CEACAM3P40198 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC12.17□□□□□ -0.46
CEACAM3P40198 MTMR3-204ENST00000401950 6018 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
CEACAM3P40198 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
CEACAM3P40198 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
CEACAM3P40198 SCARF1-201ENST00000263071 3443 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
CEACAM3P40198 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
CEACAM3P40198 RAB18-208ENST00000611151 4931 ntTSL 5 BASIC12.16□□□□□ -0.46
CEACAM3P40198 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CEACAM3P40198 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
CEACAM3P40198 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
CEACAM3P40198 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC12.16□□□□□ -0.46
CEACAM3P40198 MYO16-202ENST00000356711 6874 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
CEACAM3P40198 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
CEACAM3P40198 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
CEACAM3P40198 LINC00528-201ENST00000600723 2160 ntBASIC12.16□□□□□ -0.46
CEACAM3P40198 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
CEACAM3P40198 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC12.16□□□□□ -0.46
CEACAM3P40198 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CEACAM3P40198 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC12.16□□□□□ -0.46
CEACAM3P40198 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CEACAM3P40198 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC12.16□□□□□ -0.46
CEACAM3P40198 SLC9A8-201ENST00000361573 6094 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CEACAM3P40198 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
CEACAM3P40198 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
CEACAM3P40198 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC12.16□□□□□ -0.46
CEACAM3P40198 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
CEACAM3P40198 ITGB4-202ENST00000449880 5689 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
CEACAM3P40198 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
CEACAM3P40198 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC12.16□□□□□ -0.46
CEACAM3P40198 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
CEACAM3P40198 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC12.16□□□□□ -0.46
CEACAM3P40198 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CEACAM3P40198 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CEACAM3P40198 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CEACAM3P40198 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
CEACAM3P40198 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
CEACAM3P40198 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
CEACAM3P40198 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC12.16□□□□□ -0.46
CEACAM3P40198 POM121L8P-201ENST00000417732 1281 ntBASIC12.16□□□□□ -0.46
CEACAM3P40198 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC12.16□□□□□ -0.46
CEACAM3P40198 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
CEACAM3P40198 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
CEACAM3P40198 RPL7P3-201ENST00000441388 714 ntBASIC12.16□□□□□ -0.46
CEACAM3P40198 POM121L9P-203ENST00000441984 1285 ntBASIC12.16□□□□□ -0.46
CEACAM3P40198 CDC23-208ENST00000505120 455 ntTSL 3 BASIC12.16□□□□□ -0.46
CEACAM3P40198 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC12.16□□□□□ -0.46
CEACAM3P40198 AC104989.1-201ENST00000519711 778 ntBASIC12.16□□□□□ -0.46
CEACAM3P40198 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
CEACAM3P40198 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC12.16□□□□□ -0.46
CEACAM3P40198 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC12.16□□□□□ -0.46
CEACAM3P40198 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC12.16□□□□□ -0.46
CEACAM3P40198 AC017083.2-201ENST00000608069 979 ntBASIC12.16□□□□□ -0.46
CEACAM3P40198 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC12.16□□□□□ -0.46
CEACAM3P40198 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
CEACAM3P40198 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
CEACAM3P40198 HIC2-203ENST00000443632 6940 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CEACAM3P40198 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CEACAM3P40198 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC12.16□□□□□ -0.46
CEACAM3P40198 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC12.16□□□□□ -0.46
CEACAM3P40198 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CEACAM3P40198 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
CEACAM3P40198 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CEACAM3P40198 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CEACAM3P40198 SLC25A29-208ENST00000554912 5169 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
CEACAM3P40198 MAGI1-218ENST00000621418 6225 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
CEACAM3P40198 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
CEACAM3P40198 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC12.16□□□□□ -0.46
CEACAM3P40198 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
CEACAM3P40198 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CEACAM3P40198 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
CEACAM3P40198 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC12.16□□□□□ -0.46
CEACAM3P40198 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms