Protein–RNA interactions for Protein: P35499

SCN4A, Sodium channel protein type 4 subunit alpha, humanhuman

Predictions only

Length 1,836 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4AP35499 AC046158.3-201ENST00000624947 2558 ntBASIC16.92■□□□□ 0.3
SCN4AP35499 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC16.92■□□□□ 0.3
SCN4AP35499 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC16.92■□□□□ 0.3
SCN4AP35499 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC16.92■□□□□ 0.3
SCN4AP35499 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
SCN4AP35499 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC16.92■□□□□ 0.3
SCN4AP35499 DPEP2-202ENST00000393847 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SCN4AP35499 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC16.92■□□□□ 0.3
SCN4AP35499 ERICH1-206ENST00000522706 1551 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
SCN4AP35499 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC16.92■□□□□ 0.3
SCN4AP35499 CHRNA1-205ENST00000409542 1460 ntTSL 3 BASIC16.92■□□□□ 0.3
SCN4AP35499 FAM226B-201ENST00000602508 1490 ntBASIC16.92■□□□□ 0.3
SCN4AP35499 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
SCN4AP35499 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC16.92■□□□□ 0.3
SCN4AP35499 AL391005.1-201ENST00000623953 2435 ntBASIC16.92■□□□□ 0.3
SCN4AP35499 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
SCN4AP35499 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SCN4AP35499 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC16.91■□□□□ 0.3
SCN4AP35499 TCEA3-201ENST00000374601 1197 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SCN4AP35499 LY6G6E-227ENST00000409239 776 ntAPPRIS ALT2 TSL 4 BASIC16.91■□□□□ 0.3
SCN4AP35499 ACTBP14-201ENST00000411655 1089 ntBASIC16.91■□□□□ 0.3
SCN4AP35499 FRGCA-201ENST00000424933 422 ntTSL 3 BASIC16.91■□□□□ 0.3
SCN4AP35499 ALG1L15P-201ENST00000482834 794 ntBASIC16.91■□□□□ 0.3
SCN4AP35499 GOLGA2P8-201ENST00000505201 779 ntBASIC16.91■□□□□ 0.3
SCN4AP35499 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
SCN4AP35499 MT3-202ENST00000561640 514 ntTSL 3 BASIC16.91■□□□□ 0.3
SCN4AP35499 MKRN3-202ENST00000564592 629 ntTSL 3 BASIC16.91■□□□□ 0.3
SCN4AP35499 RN7SL455P-201ENST00000580629 282 ntBASIC16.91■□□□□ 0.3
SCN4AP35499 USP32P3-202ENST00000583574 611 ntTSL 3 BASIC16.91■□□□□ 0.3
SCN4AP35499 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SCN4AP35499 AC005746.3-201ENST00000614751 393 ntBASIC16.91■□□□□ 0.3
SCN4AP35499 MIR6125-201ENST00000618986 96 ntBASIC16.91■□□□□ 0.3
SCN4AP35499 AC010531.8-201ENST00000623341 685 ntBASIC16.91■□□□□ 0.3
SCN4AP35499 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SCN4AP35499 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
SCN4AP35499 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC16.91■□□□□ 0.3
SCN4AP35499 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC16.91■□□□□ 0.3
SCN4AP35499 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
SCN4AP35499 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
SCN4AP35499 WT1-209ENST00000530998 2421 ntTSL 2 BASIC16.91■□□□□ 0.3
SCN4AP35499 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SCN4AP35499 PDE4C-204ENST00000539010 1699 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SCN4AP35499 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
SCN4AP35499 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
SCN4AP35499 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
SCN4AP35499 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SCN4AP35499 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
SCN4AP35499 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
SCN4AP35499 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SCN4AP35499 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SCN4AP35499 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC16.91■□□□□ 0.3
SCN4AP35499 PAX6-264ENST00000640125 1375 ntTSL 5 BASIC16.91■□□□□ 0.3
SCN4AP35499 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SCN4AP35499 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SCN4AP35499 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
SCN4AP35499 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SCN4AP35499 SLC35F2-201ENST00000375682 1076 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
SCN4AP35499 KRTAP2-3-201ENST00000391418 875 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
SCN4AP35499 KRTAP10-5-201ENST00000400372 1150 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
SCN4AP35499 GGTLC4P-201ENST00000402176 664 ntBASIC16.91■□□□□ 0.3
SCN4AP35499 HNRNPA1P21-201ENST00000424115 961 ntBASIC16.91■□□□□ 0.3
SCN4AP35499 TPP1-209ENST00000528657 578 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SCN4AP35499 SLC25A3-215ENST00000551265 580 ntTSL 4 BASIC16.91■□□□□ 0.3
SCN4AP35499 LINC01490-202ENST00000551399 1260 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SCN4AP35499 BMF-206ENST00000558774 671 ntTSL 3 BASIC16.91■□□□□ 0.3
SCN4AP35499 AC084262.1-201ENST00000567818 751 ntBASIC16.91■□□□□ 0.3
SCN4AP35499 SRRM2-AS1-204ENST00000573802 818 ntTSL 2 BASIC16.91■□□□□ 0.3
SCN4AP35499 MIR4265-201ENST00000582152 99 ntBASIC16.91■□□□□ 0.3
SCN4AP35499 CCL3L3-203ENST00000619989 784 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SCN4AP35499 Metazoa_SRP.156-201ENST00000622344 262 ntBASIC16.91■□□□□ 0.3
SCN4AP35499 AC126755.5-201ENST00000622756 267 ntBASIC16.91■□□□□ 0.3
SCN4AP35499 PSMA6-217ENST00000628955 364 ntTSL 5 BASIC16.91■□□□□ 0.3
SCN4AP35499 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SCN4AP35499 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
SCN4AP35499 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC16.91■□□□□ 0.3
SCN4AP35499 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC16.91■□□□□ 0.3
SCN4AP35499 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
SCN4AP35499 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SCN4AP35499 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SCN4AP35499 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SCN4AP35499 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SCN4AP35499 HPGD-209ENST00000510901 1535 ntTSL 2 BASIC16.9■□□□□ 0.3
SCN4AP35499 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SCN4AP35499 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC16.9■□□□□ 0.3
SCN4AP35499 AP005117.1-202ENST00000581724 1908 ntBASIC16.9■□□□□ 0.3
SCN4AP35499 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SCN4AP35499 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC16.9■□□□□ 0.3
SCN4AP35499 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC16.9■□□□□ 0.3
SCN4AP35499 CNMD-203ENST00000448904 1444 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SCN4AP35499 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
SCN4AP35499 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC16.9■□□□□ 0.3
SCN4AP35499 IL18BP-201ENST00000260049 1354 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
SCN4AP35499 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
SCN4AP35499 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
SCN4AP35499 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC16.9■□□□□ 0.3
SCN4AP35499 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
SCN4AP35499 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SCN4AP35499 TMEM60-201ENST00000257663 1023 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SCN4AP35499 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
SCN4AP35499 RHOC-205ENST00000369636 786 ntTSL 2 BASIC16.9■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms