Protein–RNA interactions for Protein: P28288

ABCD3, ATP-binding cassette sub-family D member 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3P28288 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
ABCD3P28288 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
ABCD3P28288 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC13.68□□□□□ -0.22
ABCD3P28288 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC13.68□□□□□ -0.22
ABCD3P28288 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
ABCD3P28288 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC13.68□□□□□ -0.22
ABCD3P28288 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
ABCD3P28288 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
ABCD3P28288 TK2-221ENST00000620035 5060 ntTSL 2 BASIC13.67□□□□□ -0.22
ABCD3P28288 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
ABCD3P28288 TUBB1P2-201ENST00000422712 1306 ntBASIC13.67□□□□□ -0.22
ABCD3P28288 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC13.67□□□□□ -0.22
ABCD3P28288 TUBB1P1-201ENST00000503144 1300 ntBASIC13.67□□□□□ -0.22
ABCD3P28288 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
ABCD3P28288 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
ABCD3P28288 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC13.67□□□□□ -0.22
ABCD3P28288 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
ABCD3P28288 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
ABCD3P28288 INTS4P1-203ENST00000641008 3683 ntBASIC13.67□□□□□ -0.22
ABCD3P28288 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC13.67□□□□□ -0.22
ABCD3P28288 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
ABCD3P28288 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC13.67□□□□□ -0.22
ABCD3P28288 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
ABCD3P28288 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
ABCD3P28288 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC13.67□□□□□ -0.22
ABCD3P28288 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
ABCD3P28288 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
ABCD3P28288 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
ABCD3P28288 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
ABCD3P28288 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
ABCD3P28288 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
ABCD3P28288 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
ABCD3P28288 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
ABCD3P28288 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC13.67□□□□□ -0.22
ABCD3P28288 TISP43-201ENST00000409793 538 ntTSL 4 BASIC13.67□□□□□ -0.22
ABCD3P28288 PUDPP3-201ENST00000445368 636 ntBASIC13.67□□□□□ -0.22
ABCD3P28288 Z93015.1-201ENST00000451718 390 ntBASIC13.67□□□□□ -0.22
ABCD3P28288 RPL13AP20-201ENST00000459725 609 ntBASIC13.67□□□□□ -0.22
ABCD3P28288 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC13.67□□□□□ -0.22
ABCD3P28288 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC13.67□□□□□ -0.22
ABCD3P28288 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC13.67□□□□□ -0.22
ABCD3P28288 AL136301.1-201ENST00000615830 422 ntBASIC13.67□□□□□ -0.22
ABCD3P28288 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
ABCD3P28288 AL033527.4-201ENST00000641026 673 ntBASIC13.67□□□□□ -0.22
ABCD3P28288 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
ABCD3P28288 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
ABCD3P28288 AL390755.1-201ENST00000623716 2027 ntBASIC13.67□□□□□ -0.22
ABCD3P28288 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
ABCD3P28288 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
ABCD3P28288 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
ABCD3P28288 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
ABCD3P28288 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
ABCD3P28288 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
ABCD3P28288 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
ABCD3P28288 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
ABCD3P28288 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
ABCD3P28288 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC13.67□□□□□ -0.22
ABCD3P28288 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
ABCD3P28288 AC026748.1-201ENST00000624349 3251 ntBASIC13.66□□□□□ -0.22
ABCD3P28288 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC13.66□□□□□ -0.22
ABCD3P28288 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
ABCD3P28288 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
ABCD3P28288 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
ABCD3P28288 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
ABCD3P28288 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
ABCD3P28288 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
ABCD3P28288 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
ABCD3P28288 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
ABCD3P28288 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
ABCD3P28288 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
ABCD3P28288 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
ABCD3P28288 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
ABCD3P28288 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC13.66□□□□□ -0.22
ABCD3P28288 AC015818.8-201ENST00000587907 1519 ntBASIC13.66□□□□□ -0.22
ABCD3P28288 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
ABCD3P28288 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
ABCD3P28288 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
ABCD3P28288 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
ABCD3P28288 COCH-203ENST00000460581 2688 ntTSL 2 BASIC13.66□□□□□ -0.22
ABCD3P28288 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
ABCD3P28288 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
ABCD3P28288 APOC3-202ENST00000375345 604 ntTSL 5 BASIC13.66□□□□□ -0.22
ABCD3P28288 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC13.66□□□□□ -0.22
ABCD3P28288 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
ABCD3P28288 RIT1-205ENST00000539040 919 ntTSL 2 BASIC13.66□□□□□ -0.22
ABCD3P28288 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC13.66□□□□□ -0.22
ABCD3P28288 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC13.66□□□□□ -0.22
ABCD3P28288 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC13.66□□□□□ -0.22
ABCD3P28288 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
ABCD3P28288 AC244157.2-201ENST00000616239 1006 ntBASIC13.66□□□□□ -0.22
ABCD3P28288 AP001002.3-201ENST00000623482 206 ntBASIC13.66□□□□□ -0.22
ABCD3P28288 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
ABCD3P28288 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
ABCD3P28288 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
ABCD3P28288 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC13.66□□□□□ -0.22
ABCD3P28288 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
ABCD3P28288 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC13.66□□□□□ -0.22
ABCD3P28288 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
ABCD3P28288 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
ABCD3P28288 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC13.66□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 70.3 ms