Protein–RNA interactions for Protein: P23025

XPA, DNA repair protein complementing XP-A cells, humanhuman

Predicted RBP Predictions only

Length 273 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XPAP23025 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC14.99□□□□□ -0.01
XPAP23025 INE2-201ENST00000630399 1874 ntBASIC14.99□□□□□ -0.01
XPAP23025 DMBT1P1-203ENST00000636837 4628 ntBASIC14.99□□□□□ -0.01
XPAP23025 SRC-202ENST00000373558 4304 ntTSL 5 BASIC14.99□□□□□ -0.01
XPAP23025 SF1-209ENST00000433274 2317 ntTSL 2 BASIC14.99□□□□□ -0.01
XPAP23025 PRDM16-206ENST00000511072 4282 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
XPAP23025 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
XPAP23025 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
XPAP23025 KLHL21-201ENST00000377658 4487 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
XPAP23025 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
XPAP23025 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC14.99□□□□□ -0.01
XPAP23025 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC14.99□□□□□ -0.01
XPAP23025 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
XPAP23025 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC14.99□□□□□ -0.01
XPAP23025 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
XPAP23025 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
XPAP23025 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC14.99□□□□□ -0.01
XPAP23025 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
XPAP23025 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
XPAP23025 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
XPAP23025 MIR4538-201ENST00000581377 78 ntBASIC14.99□□□□□ -0.01
XPAP23025 NAT9-222ENST00000583476 583 ntTSL 3 BASIC14.99□□□□□ -0.01
XPAP23025 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
XPAP23025 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
XPAP23025 MYOM3-202ENST00000374434 5804 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
XPAP23025 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
XPAP23025 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC14.99□□□□□ -0.01
XPAP23025 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC14.99□□□□□ -0.01
XPAP23025 AC104640.1-201ENST00000562617 2109 ntBASIC14.99□□□□□ -0.01
XPAP23025 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
XPAP23025 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
XPAP23025 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC14.99□□□□□ -0.01
XPAP23025 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
XPAP23025 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
XPAP23025 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
XPAP23025 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC14.99□□□□□ -0.01
XPAP23025 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
XPAP23025 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
XPAP23025 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC14.99□□□□□ -0.01
XPAP23025 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
XPAP23025 AC144831.1-201ENST00000573312 2656 ntBASIC14.99□□□□□ -0.01
XPAP23025 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
XPAP23025 SLC35E2B-205ENST00000617444 6283 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
XPAP23025 CACNA1G-230ENST00000514717 6699 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
XPAP23025 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC14.98□□□□□ -0.01
XPAP23025 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
XPAP23025 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
XPAP23025 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
XPAP23025 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
XPAP23025 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
XPAP23025 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
XPAP23025 NACC2-202ENST00000371753 6802 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
XPAP23025 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
XPAP23025 CACNA1G-208ENST00000442258 7226 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
XPAP23025 NAPEPLD-201ENST00000341533 4972 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
XPAP23025 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC14.98□□□□□ -0.01
XPAP23025 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
XPAP23025 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
XPAP23025 AFDN-211ENST00000447894 5475 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
XPAP23025 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
XPAP23025 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
XPAP23025 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
XPAP23025 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
XPAP23025 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
XPAP23025 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
XPAP23025 RPS3-201ENST00000278572 907 ntTSL 3 BASIC14.98□□□□□ -0.01
XPAP23025 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
XPAP23025 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
XPAP23025 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
XPAP23025 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC14.98□□□□□ -0.01
XPAP23025 GOLGA2P4-201ENST00000441462 777 ntBASIC14.98□□□□□ -0.01
XPAP23025 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC14.98□□□□□ -0.01
XPAP23025 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
XPAP23025 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC14.98□□□□□ -0.01
XPAP23025 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC14.98□□□□□ -0.01
XPAP23025 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC14.98□□□□□ -0.01
XPAP23025 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC14.98□□□□□ -0.01
XPAP23025 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC14.98□□□□□ -0.01
XPAP23025 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
XPAP23025 AC104982.3-201ENST00000581995 514 ntBASIC14.98□□□□□ -0.01
XPAP23025 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC14.98□□□□□ -0.01
XPAP23025 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC14.98□□□□□ -0.01
XPAP23025 AP001002.3-201ENST00000623482 206 ntBASIC14.98□□□□□ -0.01
XPAP23025 ABBA01031663.1-201ENST00000635630 790 ntBASIC14.98□□□□□ -0.01
XPAP23025 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
XPAP23025 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC14.98□□□□□ -0.01
XPAP23025 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
XPAP23025 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC14.98□□□□□ -0.01
XPAP23025 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
XPAP23025 ACAN-209ENST00000617301 8669 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
XPAP23025 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
XPAP23025 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC14.98□□□□□ -0.01
XPAP23025 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
XPAP23025 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC14.97□□□□□ -0.01
XPAP23025 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
XPAP23025 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC14.97□□□□□ -0.01
XPAP23025 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
XPAP23025 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC14.97□□□□□ -0.01
XPAP23025 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
XPAP23025 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms