Protein–RNA interactions for Protein: P16333

NCK1, Cytoplasmic protein NCK1, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1P16333 ALAD-201ENST00000409155 3173 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
NCK1P16333 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
NCK1P16333 TCAM1P-207ENST00000485295 1537 ntBASIC14.07□□□□□ -0.16
NCK1P16333 ADAMTSL4-203ENST00000369039 4319 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
NCK1P16333 DMTN-214ENST00000519907 2658 ntTSL 5 BASIC14.07□□□□□ -0.16
NCK1P16333 TDRD5-201ENST00000294848 3525 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
NCK1P16333 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
NCK1P16333 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
NCK1P16333 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
NCK1P16333 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
NCK1P16333 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
NCK1P16333 AC016876.1-201ENST00000415124 352 ntTSL 3 BASIC14.07□□□□□ -0.16
NCK1P16333 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC14.07□□□□□ -0.16
NCK1P16333 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC14.07□□□□□ -0.16
NCK1P16333 AL353779.1-201ENST00000434793 351 ntBASIC14.07□□□□□ -0.16
NCK1P16333 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC14.07□□□□□ -0.16
NCK1P16333 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC14.07□□□□□ -0.16
NCK1P16333 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC14.07□□□□□ -0.16
NCK1P16333 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC14.07□□□□□ -0.16
NCK1P16333 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC14.07□□□□□ -0.16
NCK1P16333 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
NCK1P16333 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
NCK1P16333 HOTTIP_1.1-201ENST00000620415 57 ntBASIC14.07□□□□□ -0.16
NCK1P16333 AL158212.4-201ENST00000624062 1286 ntBASIC14.07□□□□□ -0.16
NCK1P16333 IKZF1-218ENST00000615491 5637 ntTSL 5 BASIC14.07□□□□□ -0.16
NCK1P16333 PPP1R3D-201ENST00000370996 3630 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
NCK1P16333 TUBB3P1-201ENST00000405796 1332 ntBASIC14.07□□□□□ -0.16
NCK1P16333 DDX31-204ENST00000372159 4577 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
NCK1P16333 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
NCK1P16333 IL17RA-201ENST00000319363 8607 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
NCK1P16333 SAMD15-201ENST00000216471 2564 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
NCK1P16333 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
NCK1P16333 CARMIL2-202ENST00000545661 4119 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
NCK1P16333 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC14.07□□□□□ -0.16
NCK1P16333 IL1RL2-201ENST00000264257 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
NCK1P16333 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
NCK1P16333 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
NCK1P16333 MCM9-202ENST00000316316 5101 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
NCK1P16333 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
NCK1P16333 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC14.07□□□□□ -0.16
NCK1P16333 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
NCK1P16333 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
NCK1P16333 ZC2HC1A-201ENST00000263849 3352 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
NCK1P16333 CC2D1B-201ENST00000284376 3377 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
NCK1P16333 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
NCK1P16333 MYADML-201ENST00000474610 2147 ntBASIC14.06□□□□□ -0.16
NCK1P16333 ATG9A-201ENST00000361242 3130 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
NCK1P16333 CSPG4P12-202ENST00000559989 7790 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
NCK1P16333 MKL1-202ENST00000396617 4505 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
NCK1P16333 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC14.06□□□□□ -0.16
NCK1P16333 LDHAL6A-201ENST00000280706 2526 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
NCK1P16333 ADAM11-201ENST00000200557 4571 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
NCK1P16333 GP6-201ENST00000310373 2268 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
NCK1P16333 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
NCK1P16333 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
NCK1P16333 SCARF1-201ENST00000263071 3443 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
NCK1P16333 PDE2A-206ENST00000444035 4193 ntAPPRIS ALT1 TSL 5 BASIC14.06□□□□□ -0.16
NCK1P16333 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
NCK1P16333 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
NCK1P16333 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC14.06□□□□□ -0.16
NCK1P16333 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
NCK1P16333 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC14.06□□□□□ -0.16
NCK1P16333 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
NCK1P16333 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
NCK1P16333 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC14.06□□□□□ -0.16
NCK1P16333 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC14.06□□□□□ -0.16
NCK1P16333 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC14.06□□□□□ -0.16
NCK1P16333 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC14.06□□□□□ -0.16
NCK1P16333 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC14.06□□□□□ -0.16
NCK1P16333 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC14.06□□□□□ -0.16
NCK1P16333 AL356585.2-201ENST00000625078 2396 ntBASIC14.06□□□□□ -0.16
NCK1P16333 CDHR5-203ENST00000397542 3489 ntAPPRIS P4 TSL 1 (best) BASIC14.06□□□□□ -0.16
NCK1P16333 EHD4-201ENST00000220325 6416 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
NCK1P16333 PRR30-201ENST00000335524 2008 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
NCK1P16333 ZNF609-202ENST00000416172 3863 ntTSL 2 BASIC14.06□□□□□ -0.16
NCK1P16333 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
NCK1P16333 CRYBG1-204ENST00000633556 9909 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
NCK1P16333 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
NCK1P16333 AC008429.1-202ENST00000518818 2067 ntTSL 2 BASIC14.06□□□□□ -0.16
NCK1P16333 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
NCK1P16333 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
NCK1P16333 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
NCK1P16333 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
NCK1P16333 GPR132-202ENST00000392585 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
NCK1P16333 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
NCK1P16333 PVR-205ENST00000425690 3325 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
NCK1P16333 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
NCK1P16333 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC14.06□□□□□ -0.16
NCK1P16333 VPS52-212ENST00000445902 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
NCK1P16333 AL512306.2-201ENST00000444037 2219 ntTSL 2 BASIC14.06□□□□□ -0.16
NCK1P16333 RGS8-204ENST00000483095 1432 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
NCK1P16333 JUN-201ENST00000371222 3540 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
NCK1P16333 FGFRL1-201ENST00000264748 3100 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
NCK1P16333 PPP5D1-201ENST00000414155 1882 ntAPPRIS P5 TSL 2 BASIC14.06□□□□□ -0.16
NCK1P16333 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC14.06□□□□□ -0.16
NCK1P16333 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
NCK1P16333 CLK3P2-201ENST00000427566 1453 ntBASIC14.06□□□□□ -0.16
NCK1P16333 MAGI2-218ENST00000630991 2349 ntTSL 2 BASIC14.06□□□□□ -0.16
NCK1P16333 C7orf57-204ENST00000435376 1925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
NCK1P16333 C7orf57-206ENST00000539619 1927 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms