Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 HMGCLL1-208ENST00000508459 884 ntTSL 2 BASIC16.41■□□□□ 0.22
COL11A1P12107 AC073573.1-201ENST00000550908 481 ntTSL 3 BASIC16.41■□□□□ 0.22
COL11A1P12107 SKA2-205ENST00000580541 689 ntTSL 3 BASIC16.41■□□□□ 0.22
COL11A1P12107 RNASEK-210ENST00000593646 566 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
COL11A1P12107 MIR6074-201ENST00000612054 107 ntBASIC16.41■□□□□ 0.22
COL11A1P12107 CSAG3-203ENST00000638835 793 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
COL11A1P12107 CSAG2-204ENST00000640702 793 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
COL11A1P12107 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
COL11A1P12107 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
COL11A1P12107 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC16.41■□□□□ 0.22
COL11A1P12107 AC232323.1-201ENST00000540724 2099 ntBASIC16.41■□□□□ 0.22
COL11A1P12107 CHRNA1-204ENST00000409323 1585 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
COL11A1P12107 GPD1-205ENST00000548814 1591 ntTSL 2 BASIC16.41■□□□□ 0.22
COL11A1P12107 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
COL11A1P12107 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC16.41■□□□□ 0.22
COL11A1P12107 CNBP-201ENST00000422453 1664 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
COL11A1P12107 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC16.4■□□□□ 0.22
COL11A1P12107 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
COL11A1P12107 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC16.4■□□□□ 0.22
COL11A1P12107 LINC01433-201ENST00000419003 697 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
COL11A1P12107 THRB-AS1-202ENST00000438096 702 ntTSL 3 BASIC16.4■□□□□ 0.22
COL11A1P12107 ANAPC15-204ENST00000535234 848 ntAPPRIS P3 TSL 2 BASIC16.4■□□□□ 0.22
COL11A1P12107 KRT8P2-201ENST00000556193 944 ntBASIC16.4■□□□□ 0.22
COL11A1P12107 AC011481.2-201ENST00000585408 426 ntTSL 3 BASIC16.4■□□□□ 0.22
COL11A1P12107 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
COL11A1P12107 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC16.4■□□□□ 0.22
COL11A1P12107 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
COL11A1P12107 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC16.4■□□□□ 0.22
COL11A1P12107 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
COL11A1P12107 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
COL11A1P12107 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
COL11A1P12107 PPM1L-201ENST00000295839 1449 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
COL11A1P12107 ATF4-202ENST00000396680 1419 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
COL11A1P12107 KRT8P43-201ENST00000406052 1458 ntBASIC16.4■□□□□ 0.22
COL11A1P12107 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
COL11A1P12107 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
COL11A1P12107 AC026904.3-201ENST00000636550 1530 ntTSL 5 BASIC16.4■□□□□ 0.22
COL11A1P12107 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC16.4■□□□□ 0.22
COL11A1P12107 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
COL11A1P12107 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
COL11A1P12107 AC144831.1-201ENST00000573312 2656 ntBASIC16.4■□□□□ 0.22
COL11A1P12107 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
COL11A1P12107 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC16.4■□□□□ 0.22
COL11A1P12107 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC16.4■□□□□ 0.22
COL11A1P12107 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
COL11A1P12107 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
COL11A1P12107 TCEA3-201ENST00000374601 1197 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
COL11A1P12107 LY6G6E-227ENST00000409239 776 ntAPPRIS ALT2 TSL 4 BASIC16.4■□□□□ 0.22
COL11A1P12107 ACYP2-204ENST00000422521 1115 ntTSL 5 BASIC16.4■□□□□ 0.22
COL11A1P12107 AL592076.1-201ENST00000424448 303 ntBASIC16.4■□□□□ 0.22
COL11A1P12107 RPL37A-203ENST00000427280 698 ntTSL 5 BASIC16.4■□□□□ 0.22
COL11A1P12107 LINC00866-201ENST00000427379 418 ntTSL 2 BASIC16.4■□□□□ 0.22
COL11A1P12107 AL355376.1-201ENST00000456082 517 ntTSL 3 BASIC16.4■□□□□ 0.22
COL11A1P12107 RPL37A-206ENST00000456586 401 ntTSL 5 BASIC16.4■□□□□ 0.22
COL11A1P12107 FRMD4A-208ENST00000493380 1149 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
COL11A1P12107 IGHV1-12-201ENST00000518307 205 ntBASIC16.4■□□□□ 0.22
COL11A1P12107 RPS25-202ENST00000527673 835 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
COL11A1P12107 AC115099.1-201ENST00000570413 362 ntTSL 3 BASIC16.4■□□□□ 0.22
COL11A1P12107 RPL37A-211ENST00000598925 775 ntTSL 5 BASIC16.4■□□□□ 0.22
COL11A1P12107 IRF3-225ENST00000600022 882 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
COL11A1P12107 AC104506.1-201ENST00000609247 429 ntBASIC16.4■□□□□ 0.22
COL11A1P12107 AC138466.5-201ENST00000624002 808 ntBASIC16.4■□□□□ 0.22
COL11A1P12107 AP001184.1-201ENST00000637936 376 ntBASIC16.4■□□□□ 0.22
COL11A1P12107 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
COL11A1P12107 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
COL11A1P12107 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
COL11A1P12107 AC117503.4-201ENST00000623229 1418 ntBASIC16.4■□□□□ 0.22
COL11A1P12107 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
COL11A1P12107 CHCHD7-202ENST00000355315 1535 ntTSL 2 BASIC16.4■□□□□ 0.22
COL11A1P12107 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
COL11A1P12107 RN7SL832P-201ENST00000607781 1756 ntBASIC16.39■□□□□ 0.22
COL11A1P12107 SIAE-206ENST00000618733 1980 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.22
COL11A1P12107 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.22
COL11A1P12107 AP001267.2-201ENST00000532619 2086 ntBASIC16.39■□□□□ 0.21
COL11A1P12107 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC16.39■□□□□ 0.21
COL11A1P12107 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
COL11A1P12107 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
COL11A1P12107 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
COL11A1P12107 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
COL11A1P12107 ORC6-201ENST00000219097 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
COL11A1P12107 PIGL-201ENST00000225609 1137 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
COL11A1P12107 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
COL11A1P12107 LY86-201ENST00000230568 559 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
COL11A1P12107 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
COL11A1P12107 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
COL11A1P12107 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
COL11A1P12107 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC16.39■□□□□ 0.21
COL11A1P12107 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
COL11A1P12107 TAGLN2-203ENST00000368097 1604 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
COL11A1P12107 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
COL11A1P12107 FES-203ENST00000394302 2133 ntTSL 5 BASIC16.39■□□□□ 0.21
COL11A1P12107 SMIM29-202ENST00000394990 792 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
COL11A1P12107 CHTF8-202ENST00000398235 1073 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
COL11A1P12107 AC019109.1-201ENST00000401725 1874 ntBASIC16.39■□□□□ 0.21
COL11A1P12107 STK16-203ENST00000409516 895 ntTSL 2 BASIC16.39■□□□□ 0.21
COL11A1P12107 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
COL11A1P12107 Z82188.2-201ENST00000419128 630 ntTSL 5 BASIC16.39■□□□□ 0.21
COL11A1P12107 NUBP1-202ENST00000433392 1185 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
COL11A1P12107 AL663074.1-201ENST00000436642 299 ntTSL 3 BASIC16.39■□□□□ 0.21
COL11A1P12107 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC16.39■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 52.7 ms