Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
UBCP0CG48 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC13.09□□□□□ -0.31
UBCP0CG48 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
UBCP0CG48 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.31
UBCP0CG48 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.31
UBCP0CG48 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
UBCP0CG48 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
UBCP0CG48 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
UBCP0CG48 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC13.08□□□□□ -0.31
UBCP0CG48 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
UBCP0CG48 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
UBCP0CG48 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
UBCP0CG48 KDR-201ENST00000263923 5831 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
UBCP0CG48 NFATC3-203ENST00000349223 6328 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
UBCP0CG48 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
UBCP0CG48 LAMB2-202ENST00000418109 5674 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
UBCP0CG48 PCDHB16-201ENST00000609684 5001 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
UBCP0CG48 SYN2-205ENST00000620175 3871 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
UBCP0CG48 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
UBCP0CG48 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
UBCP0CG48 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC13.08□□□□□ -0.32
UBCP0CG48 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
UBCP0CG48 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC13.08□□□□□ -0.32
UBCP0CG48 SCARF1-201ENST00000263071 3443 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
UBCP0CG48 PGLYRP2-201ENST00000292609 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
UBCP0CG48 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC13.08□□□□□ -0.32
UBCP0CG48 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
UBCP0CG48 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC13.08□□□□□ -0.32
UBCP0CG48 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
UBCP0CG48 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
UBCP0CG48 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
UBCP0CG48 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
UBCP0CG48 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
UBCP0CG48 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
UBCP0CG48 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC13.08□□□□□ -0.32
UBCP0CG48 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
UBCP0CG48 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
UBCP0CG48 TPRX2P-201ENST00000535362 881 ntBASIC13.08□□□□□ -0.32
UBCP0CG48 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC13.08□□□□□ -0.32
UBCP0CG48 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC13.08□□□□□ -0.32
UBCP0CG48 AC104794.3-201ENST00000566840 1248 ntBASIC13.08□□□□□ -0.32
UBCP0CG48 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC13.08□□□□□ -0.32
UBCP0CG48 AC008738.7-201ENST00000609744 511 ntBASIC13.08□□□□□ -0.32
UBCP0CG48 AL662799.1-202ENST00000614205 422 ntBASIC13.08□□□□□ -0.32
UBCP0CG48 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC13.08□□□□□ -0.32
UBCP0CG48 AC004840.1-201ENST00000636359 365 ntBASIC13.08□□□□□ -0.32
UBCP0CG48 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
UBCP0CG48 AL121992.1-201ENST00000428945 2845 ntTSL 2 BASIC13.08□□□□□ -0.32
UBCP0CG48 EPHB3-201ENST00000330394 4236 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
UBCP0CG48 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
UBCP0CG48 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
UBCP0CG48 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC13.08□□□□□ -0.32
UBCP0CG48 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC13.08□□□□□ -0.32
UBCP0CG48 SLIT3-206ENST00000519560 9706 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
UBCP0CG48 INTS4P2-202ENST00000614726 2019 ntBASIC13.08□□□□□ -0.32
UBCP0CG48 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC13.08□□□□□ -0.32
UBCP0CG48 FASN-201ENST00000306749 8565 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
UBCP0CG48 CFAP74-209ENST00000493964 5247 ntAPPRIS P5 TSL 5 BASIC13.08□□□□□ -0.32
UBCP0CG48 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC13.08□□□□□ -0.32
UBCP0CG48 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
UBCP0CG48 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
UBCP0CG48 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
UBCP0CG48 HBP1-212ENST00000485846 2420 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
UBCP0CG48 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
UBCP0CG48 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
UBCP0CG48 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
UBCP0CG48 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
UBCP0CG48 ZBTB20-215ENST00000481632 2800 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
UBCP0CG48 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC13.08□□□□□ -0.32
UBCP0CG48 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
UBCP0CG48 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
UBCP0CG48 KIAA0895L-201ENST00000290881 3550 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
UBCP0CG48 RER1-207ENST00000488353 2469 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
UBCP0CG48 PTPA-205ENST00000357197 2653 ntTSL 2 BASIC13.07□□□□□ -0.32
UBCP0CG48 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
UBCP0CG48 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
UBCP0CG48 DOCK4-206ENST00000437633 6212 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
UBCP0CG48 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC13.07□□□□□ -0.32
UBCP0CG48 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC13.07□□□□□ -0.32
UBCP0CG48 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
UBCP0CG48 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
UBCP0CG48 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
UBCP0CG48 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
UBCP0CG48 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
UBCP0CG48 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
UBCP0CG48 DMPK-219ENST00000600757 3357 ntTSL 2 BASIC13.07□□□□□ -0.32
UBCP0CG48 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
UBCP0CG48 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
UBCP0CG48 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC13.07□□□□□ -0.32
UBCP0CG48 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
UBCP0CG48 IRAK3-201ENST00000261233 8663 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
UBCP0CG48 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
UBCP0CG48 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
UBCP0CG48 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
UBCP0CG48 RPS15-201ENST00000233609 534 ntTSL 2 BASIC13.07□□□□□ -0.32
UBCP0CG48 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
UBCP0CG48 TEX30-203ENST00000376022 828 ntTSL 2 BASIC13.07□□□□□ -0.32
UBCP0CG48 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
UBCP0CG48 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC13.07□□□□□ -0.32
UBCP0CG48 TLE1P1-201ENST00000422965 589 ntBASIC13.07□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 108.2 ms