Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
HLA-DQB2P05538 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
HLA-DQB2P05538 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC15.01□□□□□ -0.01
HLA-DQB2P05538 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
HLA-DQB2P05538 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
HLA-DQB2P05538 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
HLA-DQB2P05538 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
HLA-DQB2P05538 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
HLA-DQB2P05538 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
HLA-DQB2P05538 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
HLA-DQB2P05538 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
HLA-DQB2P05538 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
HLA-DQB2P05538 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC15□□□□□ -0.01
HLA-DQB2P05538 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
HLA-DQB2P05538 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC15□□□□□ -0.01
HLA-DQB2P05538 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
HLA-DQB2P05538 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
HLA-DQB2P05538 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
HLA-DQB2P05538 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC15□□□□□ -0.01
HLA-DQB2P05538 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC15□□□□□ -0.01
HLA-DQB2P05538 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
HLA-DQB2P05538 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC15□□□□□ -0.01
HLA-DQB2P05538 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
HLA-DQB2P05538 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC15□□□□□ -0.01
HLA-DQB2P05538 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC15□□□□□ -0.01
HLA-DQB2P05538 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
HLA-DQB2P05538 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC15□□□□□ -0.01
HLA-DQB2P05538 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC15□□□□□ -0.01
HLA-DQB2P05538 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
HLA-DQB2P05538 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
HLA-DQB2P05538 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
HLA-DQB2P05538 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
HLA-DQB2P05538 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC15□□□□□ -0.01
HLA-DQB2P05538 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
HLA-DQB2P05538 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
HLA-DQB2P05538 STX1A-203ENST00000395155 783 ntTSL 2 BASIC15□□□□□ -0.01
HLA-DQB2P05538 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC15□□□□□ -0.01
HLA-DQB2P05538 KRT223P-202ENST00000449164 1292 ntBASIC15□□□□□ -0.01
HLA-DQB2P05538 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
HLA-DQB2P05538 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC15□□□□□ -0.01
HLA-DQB2P05538 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC15□□□□□ -0.01
HLA-DQB2P05538 AC017083.2-201ENST00000608069 979 ntBASIC15□□□□□ -0.01
HLA-DQB2P05538 AC133552.6-201ENST00000613406 534 ntBASIC15□□□□□ -0.01
HLA-DQB2P05538 AL136301.1-201ENST00000615830 422 ntBASIC15□□□□□ -0.01
HLA-DQB2P05538 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC15□□□□□ -0.01
HLA-DQB2P05538 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC15□□□□□ -0.01
HLA-DQB2P05538 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
HLA-DQB2P05538 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
HLA-DQB2P05538 AC215219.1-201ENST00000400706 1817 ntBASIC15□□□□□ -0.01
HLA-DQB2P05538 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
HLA-DQB2P05538 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC15□□□□□ -0.01
HLA-DQB2P05538 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
HLA-DQB2P05538 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
HLA-DQB2P05538 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
HLA-DQB2P05538 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
HLA-DQB2P05538 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
HLA-DQB2P05538 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC15□□□□□ -0.01
HLA-DQB2P05538 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC14.99□□□□□ -0.01
HLA-DQB2P05538 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
HLA-DQB2P05538 KRT8P28-201ENST00000433288 1390 ntBASIC14.99□□□□□ -0.01
HLA-DQB2P05538 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC14.99□□□□□ -0.01
HLA-DQB2P05538 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC14.99□□□□□ -0.01
HLA-DQB2P05538 AC126755.1-201ENST00000525846 6405 ntBASIC14.99□□□□□ -0.01
HLA-DQB2P05538 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
HLA-DQB2P05538 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
HLA-DQB2P05538 AC117489.1-201ENST00000625169 3217 ntBASIC14.99□□□□□ -0.01
HLA-DQB2P05538 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
HLA-DQB2P05538 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
HLA-DQB2P05538 UCKL1-AS1-201ENST00000623569 3602 ntBASIC14.99□□□□□ -0.01
HLA-DQB2P05538 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
HLA-DQB2P05538 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC14.99□□□□□ -0.01
HLA-DQB2P05538 MIR658-201ENST00000385210 100 ntBASIC14.99□□□□□ -0.01
HLA-DQB2P05538 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC14.99□□□□□ -0.01
HLA-DQB2P05538 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
HLA-DQB2P05538 OLR1-203ENST00000432556 950 ntTSL 2 BASIC14.99□□□□□ -0.01
HLA-DQB2P05538 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
HLA-DQB2P05538 CICP12-201ENST00000455801 843 ntBASIC14.99□□□□□ -0.01
HLA-DQB2P05538 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC14.99□□□□□ -0.01
HLA-DQB2P05538 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC14.99□□□□□ -0.01
HLA-DQB2P05538 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC14.99□□□□□ -0.01
HLA-DQB2P05538 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC14.99□□□□□ -0.01
HLA-DQB2P05538 AP005482.1-201ENST00000563722 1273 ntBASIC14.99□□□□□ -0.01
HLA-DQB2P05538 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC14.99□□□□□ -0.01
HLA-DQB2P05538 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
HLA-DQB2P05538 MVK-217ENST00000639206 367 ntTSL 5 BASIC14.99□□□□□ -0.01
HLA-DQB2P05538 COX11-210ENST00000639671 696 ntBASIC14.99□□□□□ -0.01
HLA-DQB2P05538 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
HLA-DQB2P05538 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
HLA-DQB2P05538 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
HLA-DQB2P05538 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
HLA-DQB2P05538 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
HLA-DQB2P05538 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
HLA-DQB2P05538 RDX-218ENST00000544551 4117 ntTSL 2 BASIC14.99□□□□□ -0.01
HLA-DQB2P05538 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
HLA-DQB2P05538 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC14.99□□□□□ -0.01
HLA-DQB2P05538 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
HLA-DQB2P05538 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
HLA-DQB2P05538 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
HLA-DQB2P05538 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC14.99□□□□□ -0.01
HLA-DQB2P05538 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms