Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 AP006248.1-201ENST00000610471 67 ntBASIC8.89□□□□□ -0.99
APOBP04114 RPL4P6-201ENST00000438116 1304 ntBASIC8.89□□□□□ -0.99
APOBP04114 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC8.89□□□□□ -0.99
APOBP04114 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
APOBP04114 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC8.89□□□□□ -0.99
APOBP04114 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC8.89□□□□□ -0.99
APOBP04114 TPPP3-205ENST00000564104 1736 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
APOBP04114 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
APOBP04114 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC8.89□□□□□ -0.99
APOBP04114 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC8.89□□□□□ -0.99
APOBP04114 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
APOBP04114 AIFM1-203ENST00000346424 1200 ntTSL 2 BASIC8.88□□□□□ -0.99
APOBP04114 AC022080.1-201ENST00000366255 781 ntBASIC8.88□□□□□ -0.99
APOBP04114 NME2-201ENST00000393183 568 ntTSL 2 BASIC8.88□□□□□ -0.99
APOBP04114 BX679664.3-201ENST00000414070 555 ntBASIC8.88□□□□□ -0.99
APOBP04114 ASS1P2-201ENST00000439895 1223 ntBASIC8.88□□□□□ -0.99
APOBP04114 B9D1-206ENST00000461069 923 ntTSL 2 BASIC8.88□□□□□ -0.99
APOBP04114 AC113935.1-201ENST00000471722 555 ntBASIC8.88□□□□□ -0.99
APOBP04114 SCGB1A1-202ENST00000534397 466 ntTSL 3 BASIC8.88□□□□□ -0.99
APOBP04114 CR383656.13-201ENST00000550928 563 ntTSL 3 BASIC8.88□□□□□ -0.99
APOBP04114 AL512310.10-201ENST00000555580 563 ntTSL 3 BASIC8.88□□□□□ -0.99
APOBP04114 SNORD3B-1-201ENST00000577988 758 ntBASIC8.88□□□□□ -0.99
APOBP04114 ZNF235-203ENST00000589248 532 ntTSL 3 BASIC8.88□□□□□ -0.99
APOBP04114 DUSP22-213ENST00000605035 1231 ntTSL 2 BASIC8.88□□□□□ -0.99
APOBP04114 IL18BP-201ENST00000260049 1354 ntAPPRIS P2 TSL 1 (best) BASIC8.88□□□□□ -0.99
APOBP04114 INCA1-201ENST00000355025 1383 ntAPPRIS P3 TSL 1 (best) BASIC8.88□□□□□ -0.99
APOBP04114 CCL5-201ENST00000603197 1365 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
APOBP04114 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
APOBP04114 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC8.88□□□□□ -0.99
APOBP04114 AL118508.1-201ENST00000613502 2345 ntBASIC8.88□□□□□ -0.99
APOBP04114 MARS-233ENST00000628866 2583 ntTSL 5 BASIC8.88□□□□□ -0.99
APOBP04114 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
APOBP04114 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC8.88□□□□□ -0.99
APOBP04114 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC8.88□□□□□ -0.99
APOBP04114 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
APOBP04114 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
APOBP04114 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC8.88□□□□□ -0.99
APOBP04114 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
APOBP04114 AC126365.1-201ENST00000578585 1514 ntBASIC8.88□□□□□ -0.99
APOBP04114 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
APOBP04114 PLSCR1-202ENST00000448787 996 ntAPPRIS ALT2 TSL 2 BASIC8.88□□□□□ -0.99
APOBP04114 AL162377.1-202ENST00000456688 1181 ntTSL 2 BASIC8.88□□□□□ -0.99
APOBP04114 BLOC1S1-202ENST00000548556 525 ntTSL 2 BASIC8.88□□□□□ -0.99
APOBP04114 AC145285.5-201ENST00000562217 361 ntBASIC8.88□□□□□ -0.99
APOBP04114 AL031705.1-201ENST00000566922 682 ntTSL 3 BASIC8.88□□□□□ -0.99
APOBP04114 FAAP24-203ENST00000589646 836 ntTSL 3 BASIC8.88□□□□□ -0.99
APOBP04114 AC106782.5-201ENST00000616011 337 ntBASIC8.88□□□□□ -0.99
APOBP04114 AL357143.1-203ENST00000639750 881 ntBASIC8.88□□□□□ -0.99
APOBP04114 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
APOBP04114 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
APOBP04114 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
APOBP04114 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC8.88□□□□□ -0.99
APOBP04114 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
APOBP04114 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
APOBP04114 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC8.88□□□□□ -0.99
APOBP04114 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC8.88□□□□□ -0.99
APOBP04114 AC020658.6-201ENST00000623564 1870 ntBASIC8.88□□□□□ -0.99
APOBP04114 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC8.88□□□□□ -0.99
APOBP04114 RFPL3-201ENST00000249007 1488 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
APOBP04114 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
APOBP04114 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
APOBP04114 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
APOBP04114 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
APOBP04114 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
APOBP04114 PLA2G12B-201ENST00000373032 1128 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
APOBP04114 PLA2G2A-201ENST00000375111 970 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
APOBP04114 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC8.88□□□□□ -0.99
APOBP04114 BUD23-204ENST00000423497 1219 ntTSL 5 BASIC8.88□□□□□ -0.99
APOBP04114 RPL38-202ENST00000439590 431 ntAPPRIS P2 TSL 2 BASIC8.88□□□□□ -0.99
APOBP04114 DLEU2-205ENST00000443587 705 ntTSL 5 BASIC8.88□□□□□ -0.99
APOBP04114 AC104964.1-201ENST00000520494 489 ntTSL 2 BASIC8.88□□□□□ -0.99
APOBP04114 AC140847.2-201ENST00000545923 501 ntTSL 3 BASIC8.88□□□□□ -0.99
APOBP04114 C12orf73-204ENST00000546819 582 ntTSL 4 BASIC8.88□□□□□ -0.99
APOBP04114 AL049840.2-201ENST00000602722 535 ntBASIC8.88□□□□□ -0.99
APOBP04114 AC048382.6-201ENST00000621980 1223 ntBASIC8.88□□□□□ -0.99
APOBP04114 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
APOBP04114 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC8.88□□□□□ -0.99
APOBP04114 GPN3-203ENST00000543199 1604 ntTSL 5 BASIC8.88□□□□□ -0.99
APOBP04114 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
APOBP04114 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
APOBP04114 AC026691.1-201ENST00000602502 2017 ntBASIC8.88□□□□□ -0.99
APOBP04114 MIF4GD-201ENST00000245551 1358 ntTSL 3 BASIC8.88□□□□□ -0.99
APOBP04114 IL1F10-201ENST00000341010 1013 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
APOBP04114 SFMBT2-202ENST00000379711 692 ntTSL 5 BASIC8.88□□□□□ -0.99
APOBP04114 Z69733.1-201ENST00000445990 632 ntTSL 3 BASIC8.88□□□□□ -0.99
APOBP04114 SLC25A15P1-201ENST00000456738 342 ntBASIC8.88□□□□□ -0.99
APOBP04114 SLC25A15P3-201ENST00000505530 290 ntBASIC8.88□□□□□ -0.99
APOBP04114 SNRPF-205ENST00000553192 552 ntTSL 4 BASIC8.88□□□□□ -0.99
APOBP04114 AL157871.1-201ENST00000555428 429 ntTSL 3 BASIC8.88□□□□□ -0.99
APOBP04114 AL021707.6-201ENST00000609212 491 ntBASIC8.88□□□□□ -0.99
APOBP04114 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
APOBP04114 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC8.88□□□□□ -0.99
APOBP04114 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC8.88□□□□□ -0.99
APOBP04114 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC8.88□□□□□ -0.99
APOBP04114 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
APOBP04114 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
APOBP04114 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
APOBP04114 FAHD2B-201ENST00000272610 1305 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
APOBP04114 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
APOBP04114 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Retrieved 100 of 98,524 protein–RNA pairs in 53.7 ms