Protein–RNA interactions for Protein: P01733

TRBV12-3, T-cell receptor beta chain V region YT35, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV12-3P01733 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
TRBV12-3P01733 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
TRBV12-3P01733 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
TRBV12-3P01733 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
TRBV12-3P01733 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC11.48□□□□□ -0.57
TRBV12-3P01733 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC11.48□□□□□ -0.57
TRBV12-3P01733 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC11.48□□□□□ -0.57
TRBV12-3P01733 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC11.48□□□□□ -0.57
TRBV12-3P01733 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC11.48□□□□□ -0.57
TRBV12-3P01733 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
TRBV12-3P01733 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
TRBV12-3P01733 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC11.48□□□□□ -0.57
TRBV12-3P01733 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
TRBV12-3P01733 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
TRBV12-3P01733 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
TRBV12-3P01733 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
TRBV12-3P01733 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
TRBV12-3P01733 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC11.48□□□□□ -0.57
TRBV12-3P01733 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC11.48□□□□□ -0.57
TRBV12-3P01733 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC11.48□□□□□ -0.57
TRBV12-3P01733 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC11.48□□□□□ -0.57
TRBV12-3P01733 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC11.48□□□□□ -0.57
TRBV12-3P01733 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
TRBV12-3P01733 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC11.48□□□□□ -0.57
TRBV12-3P01733 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC11.48□□□□□ -0.57
TRBV12-3P01733 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
TRBV12-3P01733 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
TRBV12-3P01733 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
TRBV12-3P01733 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
TRBV12-3P01733 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC11.48□□□□□ -0.57
TRBV12-3P01733 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
TRBV12-3P01733 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
TRBV12-3P01733 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
TRBV12-3P01733 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC11.48□□□□□ -0.57
TRBV12-3P01733 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC11.48□□□□□ -0.57
TRBV12-3P01733 RGS5-214ENST00000429865 754 ntTSL 3 BASIC11.48□□□□□ -0.57
TRBV12-3P01733 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC11.48□□□□□ -0.57
TRBV12-3P01733 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC11.48□□□□□ -0.57
TRBV12-3P01733 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
TRBV12-3P01733 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC11.48□□□□□ -0.57
TRBV12-3P01733 GCOM2-201ENST00000509133 1104 ntBASIC11.48□□□□□ -0.57
TRBV12-3P01733 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC11.48□□□□□ -0.57
TRBV12-3P01733 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC11.48□□□□□ -0.57
TRBV12-3P01733 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC11.48□□□□□ -0.57
TRBV12-3P01733 NAA38-206ENST00000576384 424 ntTSL 2 BASIC11.48□□□□□ -0.57
TRBV12-3P01733 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC11.48□□□□□ -0.57
TRBV12-3P01733 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC11.48□□□□□ -0.57
TRBV12-3P01733 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC11.48□□□□□ -0.57
TRBV12-3P01733 AC002472.3-201ENST00000640124 621 ntBASIC11.48□□□□□ -0.57
TRBV12-3P01733 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC11.48□□□□□ -0.57
TRBV12-3P01733 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC11.48□□□□□ -0.57
TRBV12-3P01733 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
TRBV12-3P01733 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC11.48□□□□□ -0.57
TRBV12-3P01733 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC11.48□□□□□ -0.57
TRBV12-3P01733 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
TRBV12-3P01733 AC113367.3-201ENST00000508316 1912 ntBASIC11.48□□□□□ -0.57
TRBV12-3P01733 AL354702.1-201ENST00000442006 1960 ntBASIC11.48□□□□□ -0.57
TRBV12-3P01733 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
TRBV12-3P01733 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
TRBV12-3P01733 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC11.48□□□□□ -0.57
TRBV12-3P01733 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
TRBV12-3P01733 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
TRBV12-3P01733 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
TRBV12-3P01733 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC11.48□□□□□ -0.57
TRBV12-3P01733 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
TRBV12-3P01733 OR2I1P-209ENST00000641730 5365 ntBASIC11.48□□□□□ -0.57
TRBV12-3P01733 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
TRBV12-3P01733 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
TRBV12-3P01733 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
TRBV12-3P01733 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC11.47□□□□□ -0.57
TRBV12-3P01733 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
TRBV12-3P01733 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC11.47□□□□□ -0.57
TRBV12-3P01733 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
TRBV12-3P01733 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
TRBV12-3P01733 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
TRBV12-3P01733 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC11.47□□□□□ -0.57
TRBV12-3P01733 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC11.47□□□□□ -0.57
TRBV12-3P01733 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC11.47□□□□□ -0.57
TRBV12-3P01733 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
TRBV12-3P01733 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC11.47□□□□□ -0.57
TRBV12-3P01733 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
TRBV12-3P01733 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC11.47□□□□□ -0.57
TRBV12-3P01733 AC092135.3-201ENST00000624151 1846 ntBASIC11.47□□□□□ -0.57
TRBV12-3P01733 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC11.47□□□□□ -0.57
TRBV12-3P01733 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC11.47□□□□□ -0.57
TRBV12-3P01733 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
TRBV12-3P01733 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
TRBV12-3P01733 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC11.47□□□□□ -0.57
TRBV12-3P01733 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC11.47□□□□□ -0.57
TRBV12-3P01733 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
TRBV12-3P01733 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
TRBV12-3P01733 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC11.47□□□□□ -0.57
TRBV12-3P01733 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC11.47□□□□□ -0.57
TRBV12-3P01733 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC11.47□□□□□ -0.57
TRBV12-3P01733 HIST2H2BB-201ENST00000449108 381 ntBASIC11.47□□□□□ -0.57
TRBV12-3P01733 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC11.47□□□□□ -0.57
TRBV12-3P01733 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC11.47□□□□□ -0.57
TRBV12-3P01733 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC11.47□□□□□ -0.57
TRBV12-3P01733 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC11.47□□□□□ -0.57
TRBV12-3P01733 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC11.47□□□□□ -0.57
Retrieved 100 of 98,524 protein–RNA pairs in 96.4 ms