Protein–RNA interactions for Protein: P00395

MT-CO1, Cytochrome c oxidase subunit 1, humanhuman

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-CO1P00395 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
MT-CO1P00395 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC15.25■□□□□ 0.03
MT-CO1P00395 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC15.25■□□□□ 0.03
MT-CO1P00395 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC15.25■□□□□ 0.03
MT-CO1P00395 AC108725.1-201ENST00000495472 409 ntBASIC15.25■□□□□ 0.03
MT-CO1P00395 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
MT-CO1P00395 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC15.25■□□□□ 0.03
MT-CO1P00395 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC15.25■□□□□ 0.03
MT-CO1P00395 RN7SL219P-201ENST00000582872 296 ntBASIC15.25■□□□□ 0.03
MT-CO1P00395 AC138696.2-201ENST00000607376 223 ntBASIC15.25■□□□□ 0.03
MT-CO1P00395 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC15.25■□□□□ 0.03
MT-CO1P00395 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
MT-CO1P00395 GPI-205ENST00000586425 1799 ntTSL 5 BASIC15.25■□□□□ 0.03
MT-CO1P00395 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC15.25■□□□□ 0.03
MT-CO1P00395 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
MT-CO1P00395 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
MT-CO1P00395 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
MT-CO1P00395 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC15.25■□□□□ 0.03
MT-CO1P00395 AJ011931.1-201ENST00000618749 2492 ntBASIC15.25■□□□□ 0.03
MT-CO1P00395 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC15.25■□□□□ 0.03
MT-CO1P00395 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
MT-CO1P00395 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
MT-CO1P00395 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
MT-CO1P00395 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
MT-CO1P00395 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC15.25■□□□□ 0.03
MT-CO1P00395 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
MT-CO1P00395 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
MT-CO1P00395 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
MT-CO1P00395 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
MT-CO1P00395 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
MT-CO1P00395 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC15.24■□□□□ 0.03
MT-CO1P00395 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
MT-CO1P00395 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC15.24■□□□□ 0.03
MT-CO1P00395 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
MT-CO1P00395 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
MT-CO1P00395 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC15.24■□□□□ 0.03
MT-CO1P00395 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
MT-CO1P00395 AL138725.1-201ENST00000407347 1314 ntBASIC15.24■□□□□ 0.03
MT-CO1P00395 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
MT-CO1P00395 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC15.24■□□□□ 0.03
MT-CO1P00395 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
MT-CO1P00395 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
MT-CO1P00395 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC15.24■□□□□ 0.03
MT-CO1P00395 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC15.24■□□□□ 0.03
MT-CO1P00395 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
MT-CO1P00395 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
MT-CO1P00395 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
MT-CO1P00395 APOC3-202ENST00000375345 604 ntTSL 5 BASIC15.24■□□□□ 0.03
MT-CO1P00395 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
MT-CO1P00395 TISP43-201ENST00000409793 538 ntTSL 4 BASIC15.24■□□□□ 0.03
MT-CO1P00395 AC004945.1-201ENST00000416738 983 ntBASIC15.24■□□□□ 0.03
MT-CO1P00395 CHMP1AP1-201ENST00000445563 662 ntBASIC15.24■□□□□ 0.03
MT-CO1P00395 Z93015.1-201ENST00000451718 390 ntBASIC15.24■□□□□ 0.03
MT-CO1P00395 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC15.24■□□□□ 0.03
MT-CO1P00395 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
MT-CO1P00395 RPSAP36-202ENST00000494591 1261 ntBASIC15.24■□□□□ 0.03
MT-CO1P00395 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
MT-CO1P00395 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
MT-CO1P00395 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
MT-CO1P00395 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC15.24■□□□□ 0.03
MT-CO1P00395 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC15.24■□□□□ 0.03
MT-CO1P00395 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC15.24■□□□□ 0.03
MT-CO1P00395 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC15.24■□□□□ 0.03
MT-CO1P00395 KLK3-211ENST00000597483 810 ntTSL 2 BASIC15.24■□□□□ 0.03
MT-CO1P00395 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC15.24■□□□□ 0.03
MT-CO1P00395 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
MT-CO1P00395 AC003102.2-201ENST00000589195 1469 ntBASIC15.24■□□□□ 0.03
MT-CO1P00395 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
MT-CO1P00395 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC15.24■□□□□ 0.03
MT-CO1P00395 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC15.24■□□□□ 0.03
MT-CO1P00395 LINC01101-201ENST00000622953 1884 ntBASIC15.24■□□□□ 0.03
MT-CO1P00395 AC013726.1-201ENST00000563747 2285 ntBASIC15.24■□□□□ 0.03
MT-CO1P00395 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
MT-CO1P00395 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC15.24■□□□□ 0.03
MT-CO1P00395 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
MT-CO1P00395 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
MT-CO1P00395 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
MT-CO1P00395 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC15.23■□□□□ 0.03
MT-CO1P00395 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC15.23■□□□□ 0.03
MT-CO1P00395 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
MT-CO1P00395 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC15.23■□□□□ 0.03
MT-CO1P00395 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
MT-CO1P00395 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC15.23■□□□□ 0.03
MT-CO1P00395 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC15.23■□□□□ 0.03
MT-CO1P00395 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
MT-CO1P00395 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC15.23■□□□□ 0.03
MT-CO1P00395 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC15.23■□□□□ 0.03
MT-CO1P00395 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
MT-CO1P00395 FGD5P1-202ENST00000614866 2498 ntBASIC15.23■□□□□ 0.03
MT-CO1P00395 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
MT-CO1P00395 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
MT-CO1P00395 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC15.23■□□□□ 0.03
MT-CO1P00395 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
MT-CO1P00395 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
MT-CO1P00395 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
MT-CO1P00395 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
MT-CO1P00395 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
MT-CO1P00395 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
MT-CO1P00395 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
MT-CO1P00395 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC15.23■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 82.6 ms