Protein–RNA interactions for Protein: O95741

CPNE6, Copine-6, humanhuman

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6O95741 ATP6V0CP2-201ENST00000469409 207 ntBASIC14.6□□□□□ -0.07
CPNE6O95741 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC14.6□□□□□ -0.07
CPNE6O95741 SCARNA20.5-201ENST00000516991 142 ntBASIC14.6□□□□□ -0.07
CPNE6O95741 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC14.6□□□□□ -0.07
CPNE6O95741 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC14.6□□□□□ -0.07
CPNE6O95741 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CPNE6O95741 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC14.6□□□□□ -0.07
CPNE6O95741 KC6-205ENST00000599934 556 ntTSL 4 BASIC14.6□□□□□ -0.07
CPNE6O95741 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC14.6□□□□□ -0.07
CPNE6O95741 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
CPNE6O95741 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CPNE6O95741 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CPNE6O95741 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC14.6□□□□□ -0.07
CPNE6O95741 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
CPNE6O95741 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CPNE6O95741 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
CPNE6O95741 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CPNE6O95741 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CPNE6O95741 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
CPNE6O95741 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC14.6□□□□□ -0.07
CPNE6O95741 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC14.6□□□□□ -0.07
CPNE6O95741 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC14.59□□□□□ -0.07
CPNE6O95741 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
CPNE6O95741 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CPNE6O95741 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
CPNE6O95741 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CPNE6O95741 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
CPNE6O95741 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CPNE6O95741 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC14.59□□□□□ -0.07
CPNE6O95741 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
CPNE6O95741 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CPNE6O95741 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC14.59□□□□□ -0.07
CPNE6O95741 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC14.59□□□□□ -0.07
CPNE6O95741 ZBED1P1-201ENST00000502364 1930 ntBASIC14.59□□□□□ -0.07
CPNE6O95741 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC14.59□□□□□ -0.07
CPNE6O95741 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CPNE6O95741 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC14.59□□□□□ -0.07
CPNE6O95741 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC14.59□□□□□ -0.07
CPNE6O95741 ZBTB45P1-201ENST00000452761 1456 ntBASIC14.59□□□□□ -0.07
CPNE6O95741 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CPNE6O95741 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CPNE6O95741 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
CPNE6O95741 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CPNE6O95741 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CPNE6O95741 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC14.59□□□□□ -0.07
CPNE6O95741 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CPNE6O95741 HNRNPA1P32-201ENST00000396326 963 ntBASIC14.59□□□□□ -0.07
CPNE6O95741 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CPNE6O95741 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC14.59□□□□□ -0.07
CPNE6O95741 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC14.59□□□□□ -0.07
CPNE6O95741 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
CPNE6O95741 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC14.59□□□□□ -0.07
CPNE6O95741 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC14.59□□□□□ -0.07
CPNE6O95741 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CPNE6O95741 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC14.59□□□□□ -0.07
CPNE6O95741 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC14.59□□□□□ -0.07
CPNE6O95741 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC14.59□□□□□ -0.07
CPNE6O95741 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC14.59□□□□□ -0.07
CPNE6O95741 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CPNE6O95741 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CPNE6O95741 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CPNE6O95741 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CPNE6O95741 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CPNE6O95741 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC14.59□□□□□ -0.07
CPNE6O95741 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CPNE6O95741 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CPNE6O95741 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC14.59□□□□□ -0.07
CPNE6O95741 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CPNE6O95741 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
CPNE6O95741 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
CPNE6O95741 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC14.59□□□□□ -0.07
CPNE6O95741 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC14.59□□□□□ -0.07
CPNE6O95741 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC14.58□□□□□ -0.07
CPNE6O95741 AL928921.2-201ENST00000641325 2442 ntBASIC14.58□□□□□ -0.07
CPNE6O95741 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
CPNE6O95741 TKT-201ENST00000296289 1931 ntTSL 5 BASIC14.58□□□□□ -0.07
CPNE6O95741 MBLAC2-202ENST00000514906 1936 ntBASIC14.58□□□□□ -0.07
CPNE6O95741 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
CPNE6O95741 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
CPNE6O95741 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
CPNE6O95741 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC14.58□□□□□ -0.07
CPNE6O95741 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC14.58□□□□□ -0.07
CPNE6O95741 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC14.58□□□□□ -0.07
CPNE6O95741 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC14.58□□□□□ -0.07
CPNE6O95741 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
CPNE6O95741 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
CPNE6O95741 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC14.58□□□□□ -0.07
CPNE6O95741 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
CPNE6O95741 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CPNE6O95741 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.08
CPNE6O95741 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CPNE6O95741 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
CPNE6O95741 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CPNE6O95741 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CPNE6O95741 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CPNE6O95741 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
CPNE6O95741 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
CPNE6O95741 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
CPNE6O95741 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC14.58□□□□□ -0.08
CPNE6O95741 RGS5-214ENST00000429865 754 ntTSL 3 BASIC14.58□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 60.7 ms