Protein–RNA interactions for Protein: O75909

CCNK, Cyclin-K, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNKO75909 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CCNKO75909 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC12.9□□□□□ -0.34
CCNKO75909 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC12.9□□□□□ -0.34
CCNKO75909 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CCNKO75909 AL450472.2-201ENST00000603663 1156 ntBASIC12.9□□□□□ -0.34
CCNKO75909 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CCNKO75909 AL355877.3-201ENST00000622820 899 ntBASIC12.9□□□□□ -0.34
CCNKO75909 MAD1L1-201ENST00000265854 2718 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CCNKO75909 TMOD1-201ENST00000259365 3343 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CCNKO75909 EDC3-201ENST00000315127 3763 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CCNKO75909 HIST2H2BF-201ENST00000369167 1954 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
CCNKO75909 ALCAM-201ENST00000306107 4701 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CCNKO75909 PAN3-AS1-201ENST00000563843 1351 ntBASIC12.9□□□□□ -0.34
CCNKO75909 SEMA4D-212ENST00000450295 5684 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CCNKO75909 SLC13A5-202ENST00000381074 1738 ntTSL 2 BASIC12.9□□□□□ -0.34
CCNKO75909 CTR9-201ENST00000361367 4586 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CCNKO75909 SIRT2-201ENST00000249396 2070 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
CCNKO75909 SIRT2-204ENST00000392081 2062 ntAPPRIS ALT1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CCNKO75909 SAP30BP-202ENST00000355423 2439 ntTSL 2 BASIC12.9□□□□□ -0.34
CCNKO75909 PAX8-202ENST00000263335 3735 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CCNKO75909 SH2D7-201ENST00000328828 2750 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
CCNKO75909 HOXB13-201ENST00000290295 3467 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CCNKO75909 JMJD6-203ENST00000445478 5303 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CCNKO75909 ZNF410-201ENST00000324593 2293 ntTSL 1 (best) BASIC12.9□□□□□ -0.35
CCNKO75909 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC12.9□□□□□ -0.35
CCNKO75909 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.35
CCNKO75909 NPC1-201ENST00000269228 5157 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
CCNKO75909 ACO2-201ENST00000216254 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
CCNKO75909 NOP58-201ENST00000264279 2046 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CCNKO75909 AC090643.2-201ENST00000623442 2029 ntBASIC12.89□□□□□ -0.35
CCNKO75909 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC12.89□□□□□ -0.35
CCNKO75909 PCDHA6-201ENST00000378126 3267 ntBASIC12.89□□□□□ -0.35
CCNKO75909 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
CCNKO75909 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC12.89□□□□□ -0.35
CCNKO75909 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CCNKO75909 ADAMTSL2-203ENST00000393061 4270 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CCNKO75909 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CCNKO75909 AOC3-201ENST00000308423 4026 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CCNKO75909 SPCS3-201ENST00000503362 4571 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CCNKO75909 Z98257.2-202ENST00000641138 1548 ntBASIC12.89□□□□□ -0.35
CCNKO75909 AL589702.1-201ENST00000641229 1509 ntBASIC12.89□□□□□ -0.35
CCNKO75909 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CCNKO75909 ZBTB44-202ENST00000397753 3951 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
CCNKO75909 SLC5A8-201ENST00000536262 4178 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CCNKO75909 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CCNKO75909 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
CCNKO75909 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
CCNKO75909 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC12.89□□□□□ -0.35
CCNKO75909 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC12.89□□□□□ -0.35
CCNKO75909 DUSP5P1-201ENST00000441325 1139 ntBASIC12.89□□□□□ -0.35
CCNKO75909 FGFR3P6-201ENST00000457012 610 ntBASIC12.89□□□□□ -0.35
CCNKO75909 FOSL1P1-201ENST00000511041 816 ntBASIC12.89□□□□□ -0.35
CCNKO75909 NMU-205ENST00000511469 756 ntTSL 3 BASIC12.89□□□□□ -0.35
CCNKO75909 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC12.89□□□□□ -0.35
CCNKO75909 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC12.89□□□□□ -0.35
CCNKO75909 AC025062.2-201ENST00000605477 670 ntBASIC12.89□□□□□ -0.35
CCNKO75909 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC12.89□□□□□ -0.35
CCNKO75909 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC12.89□□□□□ -0.35
CCNKO75909 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CCNKO75909 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC12.89□□□□□ -0.35
CCNKO75909 ELOVL4-201ENST00000369816 3042 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CCNKO75909 SRSF1-205ENST00000582730 3117 ntTSL 2 BASIC12.89□□□□□ -0.35
CCNKO75909 CCDC92-208ENST00000545135 4883 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
CCNKO75909 NRG1-201ENST00000287842 2035 ntAPPRIS P4 TSL 1 (best) BASIC12.89□□□□□ -0.35
CCNKO75909 APBB3-205ENST00000412920 1455 ntAPPRIS ALT1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CCNKO75909 NOA1-201ENST00000264230 3415 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CCNKO75909 ARFIP2-210ENST00000614314 3846 ntTSL 2 BASIC12.89□□□□□ -0.35
CCNKO75909 KNDC1-202ENST00000368571 3925 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CCNKO75909 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC12.89□□□□□ -0.35
CCNKO75909 MAP2K4P1-202ENST00000602584 2539 ntTSL 2 BASIC12.89□□□□□ -0.35
CCNKO75909 CPPED1-201ENST00000261660 1898 ntTSL 2 BASIC12.89□□□□□ -0.35
CCNKO75909 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
CCNKO75909 ANKRD36BP2-202ENST00000421951 1899 ntTSL 3 BASIC12.89□□□□□ -0.35
CCNKO75909 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC12.88□□□□□ -0.35
CCNKO75909 ADAMTSL4-201ENST00000271643 4250 ntAPPRIS P3 TSL 5 BASIC12.88□□□□□ -0.35
CCNKO75909 AL691432.1-201ENST00000596308 1422 ntBASIC12.88□□□□□ -0.35
CCNKO75909 POLD1-210ENST00000599857 3435 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CCNKO75909 TRPC7-201ENST00000352189 2241 ntTSL 5 BASIC12.88□□□□□ -0.35
CCNKO75909 ARHGAP45-203ENST00000543365 3750 ntAPPRIS ALT2 TSL 2 BASIC12.88□□□□□ -0.35
CCNKO75909 TMEM168-201ENST00000312814 7470 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CCNKO75909 VAMP7-202ENST00000286448 2646 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CCNKO75909 VENTX-201ENST00000325980 2911 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CCNKO75909 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CCNKO75909 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC12.88□□□□□ -0.35
CCNKO75909 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
CCNKO75909 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CCNKO75909 RNU1-129P-201ENST00000384064 167 ntBASIC12.88□□□□□ -0.35
CCNKO75909 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CCNKO75909 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
CCNKO75909 LSM5-204ENST00000409909 740 ntTSL 2 BASIC12.88□□□□□ -0.35
CCNKO75909 AC136604.1-202ENST00000425471 771 ntBASIC12.88□□□□□ -0.35
CCNKO75909 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
CCNKO75909 MTRF1LP2-201ENST00000506027 1122 ntBASIC12.88□□□□□ -0.35
CCNKO75909 U1.21-201ENST00000580816 167 ntBASIC12.88□□□□□ -0.35
CCNKO75909 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC12.88□□□□□ -0.35
CCNKO75909 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CCNKO75909 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC12.88□□□□□ -0.35
CCNKO75909 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
CCNKO75909 PPP1R10-201ENST00000376511 4525 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CCNKO75909 PPHLN1-206ENST00000395580 1693 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 65.1 ms