Protein–RNA interactions for Protein: O75346

ZNF253, Zinc finger protein 253, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF253O75346 CYTH2-203ENST00000427476 4606 ntAPPRIS ALT1 TSL 1 (best) BASIC11.65□□□□□ -0.54
ZNF253O75346 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
ZNF253O75346 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC11.65□□□□□ -0.54
ZNF253O75346 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
ZNF253O75346 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC11.65□□□□□ -0.54
ZNF253O75346 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
ZNF253O75346 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
ZNF253O75346 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC11.65□□□□□ -0.54
ZNF253O75346 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC11.65□□□□□ -0.54
ZNF253O75346 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC11.65□□□□□ -0.54
ZNF253O75346 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC11.65□□□□□ -0.54
ZNF253O75346 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC11.65□□□□□ -0.54
ZNF253O75346 HLA-V-204ENST00000476601 1289 ntBASIC11.65□□□□□ -0.54
ZNF253O75346 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC11.65□□□□□ -0.54
ZNF253O75346 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
ZNF253O75346 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC11.65□□□□□ -0.54
ZNF253O75346 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
ZNF253O75346 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC11.65□□□□□ -0.54
ZNF253O75346 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC11.65□□□□□ -0.54
ZNF253O75346 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC11.65□□□□□ -0.54
ZNF253O75346 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC11.65□□□□□ -0.54
ZNF253O75346 SAMD11P1-201ENST00000571429 661 ntBASIC11.65□□□□□ -0.54
ZNF253O75346 MIR4453-201ENST00000584019 89 ntBASIC11.65□□□□□ -0.54
ZNF253O75346 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC11.65□□□□□ -0.54
ZNF253O75346 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
ZNF253O75346 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC11.65□□□□□ -0.54
ZNF253O75346 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
ZNF253O75346 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC11.65□□□□□ -0.54
ZNF253O75346 USP47-202ENST00000339865 7775 ntTSL 2 BASIC11.65□□□□□ -0.54
ZNF253O75346 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
ZNF253O75346 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
ZNF253O75346 CACNA2D2-204ENST00000424201 5206 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
ZNF253O75346 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC11.65□□□□□ -0.54
ZNF253O75346 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
ZNF253O75346 OR52A1-202ENST00000380367 9783 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
ZNF253O75346 RNF145-202ENST00000424310 3613 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
ZNF253O75346 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC11.65□□□□□ -0.54
ZNF253O75346 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC11.65□□□□□ -0.54
ZNF253O75346 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC11.65□□□□□ -0.54
ZNF253O75346 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC11.65□□□□□ -0.54
ZNF253O75346 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC11.65□□□□□ -0.54
ZNF253O75346 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
ZNF253O75346 NCOA7-203ENST00000392477 6457 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
ZNF253O75346 JUN-201ENST00000371222 3540 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
ZNF253O75346 ALAS1-204ENST00000469224 2125 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
ZNF253O75346 ZFP2-201ENST00000361362 2429 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
ZNF253O75346 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
ZNF253O75346 MANBA-202ENST00000505239 2577 ntTSL 2 BASIC11.65□□□□□ -0.55
ZNF253O75346 MED12L-202ENST00000309237 2862 ntAPPRIS ALT2 TSL 2 BASIC11.65□□□□□ -0.55
ZNF253O75346 HLCS-201ENST00000336648 6010 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
ZNF253O75346 LRRC20-201ENST00000355790 3414 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
ZNF253O75346 SMTN-201ENST00000333137 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
ZNF253O75346 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC11.64□□□□□ -0.55
ZNF253O75346 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC11.64□□□□□ -0.55
ZNF253O75346 SLC9A7P1-202ENST00000556476 2239 ntBASIC11.64□□□□□ -0.55
ZNF253O75346 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC11.64□□□□□ -0.55
ZNF253O75346 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC11.64□□□□□ -0.55
ZNF253O75346 TBX3-202ENST00000349155 4723 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
ZNF253O75346 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
ZNF253O75346 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
ZNF253O75346 SAMD4A-201ENST00000251091 6565 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
ZNF253O75346 ZNF641-201ENST00000301042 4544 ntTSL 5 BASIC11.64□□□□□ -0.55
ZNF253O75346 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC11.64□□□□□ -0.55
ZNF253O75346 DNM2-204ENST00000408974 3013 ntAPPRIS ALT1 TSL 2 BASIC11.64□□□□□ -0.55
ZNF253O75346 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
ZNF253O75346 PEAR1-201ENST00000292357 4866 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
ZNF253O75346 GALNT16-201ENST00000337827 5708 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
ZNF253O75346 B4GALT6-201ENST00000237019 2128 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
ZNF253O75346 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
ZNF253O75346 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC11.64□□□□□ -0.55
ZNF253O75346 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC11.64□□□□□ -0.55
ZNF253O75346 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC11.64□□□□□ -0.55
ZNF253O75346 COA5-202ENST00000409997 557 ntTSL 4 BASIC11.64□□□□□ -0.55
ZNF253O75346 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC11.64□□□□□ -0.55
ZNF253O75346 KRT18P64-201ENST00000434946 1219 ntBASIC11.64□□□□□ -0.55
ZNF253O75346 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC11.64□□□□□ -0.55
ZNF253O75346 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
ZNF253O75346 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
ZNF253O75346 SATB1-217ENST00000493952 626 ntTSL 3 BASIC11.64□□□□□ -0.55
ZNF253O75346 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC11.64□□□□□ -0.55
ZNF253O75346 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC11.64□□□□□ -0.55
ZNF253O75346 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC11.64□□□□□ -0.55
ZNF253O75346 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC11.64□□□□□ -0.55
ZNF253O75346 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
ZNF253O75346 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC11.64□□□□□ -0.55
ZNF253O75346 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
ZNF253O75346 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC11.64□□□□□ -0.55
ZNF253O75346 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC11.64□□□□□ -0.55
ZNF253O75346 MIR4469-201ENST00000583919 79 ntBASIC11.64□□□□□ -0.55
ZNF253O75346 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC11.64□□□□□ -0.55
ZNF253O75346 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC11.64□□□□□ -0.55
ZNF253O75346 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC11.64□□□□□ -0.55
ZNF253O75346 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC11.64□□□□□ -0.55
ZNF253O75346 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC11.64□□□□□ -0.55
ZNF253O75346 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC11.64□□□□□ -0.55
ZNF253O75346 HOTTIP_1.1-201ENST00000620415 57 ntBASIC11.64□□□□□ -0.55
ZNF253O75346 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC11.64□□□□□ -0.55
ZNF253O75346 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
ZNF253O75346 HGNC:18790-201ENST00000397958 2650 ntAPPRIS P1 TSL 2 BASIC11.64□□□□□ -0.55
ZNF253O75346 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms