Protein–RNA interactions for Protein: O15554

KCNN4, Intermediate conductance calcium-activated potassium channel protein 4, humanhuman

Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNN4O15554 SERF2-209ENST00000409646 559 ntTSL 4 BASIC15.29■□□□□ 0.04
KCNN4O15554 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
KCNN4O15554 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC15.29■□□□□ 0.04
KCNN4O15554 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
KCNN4O15554 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC15.29■□□□□ 0.04
KCNN4O15554 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC15.29■□□□□ 0.04
KCNN4O15554 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
KCNN4O15554 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
KCNN4O15554 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC15.29■□□□□ 0.04
KCNN4O15554 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
KCNN4O15554 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
KCNN4O15554 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC15.29■□□□□ 0.04
KCNN4O15554 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
KCNN4O15554 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
KCNN4O15554 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
KCNN4O15554 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
KCNN4O15554 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC15.29■□□□□ 0.04
KCNN4O15554 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
KCNN4O15554 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
KCNN4O15554 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
KCNN4O15554 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
KCNN4O15554 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC15.28■□□□□ 0.04
KCNN4O15554 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
KCNN4O15554 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
KCNN4O15554 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
KCNN4O15554 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
KCNN4O15554 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
KCNN4O15554 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC15.28■□□□□ 0.04
KCNN4O15554 AC134312.5-201ENST00000568031 1313 ntBASIC15.28■□□□□ 0.04
KCNN4O15554 MRPL37P1-201ENST00000592451 1337 ntBASIC15.28■□□□□ 0.04
KCNN4O15554 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
KCNN4O15554 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC15.28■□□□□ 0.04
KCNN4O15554 AC131206.1-201ENST00000538078 1211 ntBASIC15.28■□□□□ 0.04
KCNN4O15554 AC145423.3-201ENST00000615987 467 ntBASIC15.28■□□□□ 0.04
KCNN4O15554 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
KCNN4O15554 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
KCNN4O15554 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
KCNN4O15554 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
KCNN4O15554 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC15.28■□□□□ 0.04
KCNN4O15554 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC15.28■□□□□ 0.04
KCNN4O15554 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
KCNN4O15554 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
KCNN4O15554 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC15.28■□□□□ 0.04
KCNN4O15554 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC15.28■□□□□ 0.04
KCNN4O15554 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
KCNN4O15554 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
KCNN4O15554 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC15.27■□□□□ 0.04
KCNN4O15554 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
KCNN4O15554 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
KCNN4O15554 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC15.27■□□□□ 0.04
KCNN4O15554 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC15.27■□□□□ 0.04
KCNN4O15554 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.04
KCNN4O15554 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.04
KCNN4O15554 AC005840.4-201ENST00000541242 2494 ntBASIC15.27■□□□□ 0.04
KCNN4O15554 USP4-203ENST00000415188 1454 ntTSL 3 BASIC15.27■□□□□ 0.04
KCNN4O15554 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
KCNN4O15554 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
KCNN4O15554 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
KCNN4O15554 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC15.27■□□□□ 0.04
KCNN4O15554 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
KCNN4O15554 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
KCNN4O15554 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
KCNN4O15554 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
KCNN4O15554 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
KCNN4O15554 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC15.27■□□□□ 0.04
KCNN4O15554 FUK-202ENST00000378912 3925 ntTSL 2 BASIC15.27■□□□□ 0.04
KCNN4O15554 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.04
KCNN4O15554 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
KCNN4O15554 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
KCNN4O15554 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
KCNN4O15554 RN7SKP230-201ENST00000365642 335 ntBASIC15.27■□□□□ 0.04
KCNN4O15554 MGST3-203ENST00000367885 680 ntTSL 2 BASIC15.27■□□□□ 0.04
KCNN4O15554 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
KCNN4O15554 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
KCNN4O15554 BAATP1-201ENST00000412284 1225 ntBASIC15.27■□□□□ 0.04
KCNN4O15554 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
KCNN4O15554 AC245100.3-201ENST00000441281 285 ntBASIC15.27■□□□□ 0.04
KCNN4O15554 AC012441.1-201ENST00000446669 685 ntBASIC15.27■□□□□ 0.04
KCNN4O15554 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
KCNN4O15554 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC15.27■□□□□ 0.04
KCNN4O15554 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC15.27■□□□□ 0.04
KCNN4O15554 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC15.27■□□□□ 0.04
KCNN4O15554 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
KCNN4O15554 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC15.27■□□□□ 0.04
KCNN4O15554 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
KCNN4O15554 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
KCNN4O15554 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC15.27■□□□□ 0.03
KCNN4O15554 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC15.27■□□□□ 0.03
KCNN4O15554 AC041040.2-201ENST00000622926 2899 ntBASIC15.27■□□□□ 0.03
KCNN4O15554 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC15.27■□□□□ 0.03
KCNN4O15554 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC15.27■□□□□ 0.03
KCNN4O15554 AC012617.1-204ENST00000586340 2305 ntBASIC15.27■□□□□ 0.03
KCNN4O15554 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
KCNN4O15554 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC15.27■□□□□ 0.03
KCNN4O15554 ADK-205ENST00000539909 1866 ntTSL 2 BASIC15.27■□□□□ 0.03
KCNN4O15554 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC15.27■□□□□ 0.03
KCNN4O15554 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
KCNN4O15554 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
KCNN4O15554 MYADML-201ENST00000474610 2147 ntBASIC15.26■□□□□ 0.03
KCNN4O15554 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms