Protein–RNA interactions for Protein: O15417

TNRC18, Trinucleotide repeat-containing gene 18 protein, humanhuman

Predicted RBP Predictions only

Length 2,968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC18O15417 SMCO4-202ENST00000525141 889 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
TNRC18O15417 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
TNRC18O15417 DLX4-206ENST00000611342 1662 ntBASIC15.35■□□□□ 0.05
TNRC18O15417 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
TNRC18O15417 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC15.35■□□□□ 0.05
TNRC18O15417 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC15.35■□□□□ 0.05
TNRC18O15417 PPP4R1L-201ENST00000244070 1474 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
TNRC18O15417 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TNRC18O15417 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC15.34■□□□□ 0.05
TNRC18O15417 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC15.34■□□□□ 0.05
TNRC18O15417 TAGLN2-201ENST00000320307 709 ntAPPRIS P1 TSL 3 BASIC15.34■□□□□ 0.05
TNRC18O15417 AC090587.1-201ENST00000415809 494 ntTSL 3 BASIC15.34■□□□□ 0.05
TNRC18O15417 AL161644.1-201ENST00000426901 1111 ntTSL 2 BASIC15.34■□□□□ 0.05
TNRC18O15417 AL121972.2-201ENST00000431108 556 ntTSL 4 BASIC15.34■□□□□ 0.05
TNRC18O15417 HAND2-AS1-208ENST00000504740 837 ntTSL 3 BASIC15.34■□□□□ 0.05
TNRC18O15417 AC105424.1-201ENST00000514583 209 ntBASIC15.34■□□□□ 0.05
TNRC18O15417 IGHV3OR16-11-201ENST00000565524 349 ntBASIC15.34■□□□□ 0.05
TNRC18O15417 SMIM22-206ENST00000589327 629 ntAPPRIS P4 TSL 1 (best) BASIC15.34■□□□□ 0.05
TNRC18O15417 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
TNRC18O15417 SIAE-206ENST00000618733 1980 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
TNRC18O15417 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
TNRC18O15417 CREB5-202ENST00000396298 2001 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
TNRC18O15417 LIMS2-206ENST00000409754 1620 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
TNRC18O15417 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC15.34■□□□□ 0.05
TNRC18O15417 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
TNRC18O15417 EPPIN-201ENST00000336443 1217 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
TNRC18O15417 MT1X-202ENST00000562939 538 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
TNRC18O15417 AC026461.1-201ENST00000567563 551 ntTSL 4 BASIC15.34■□□□□ 0.05
TNRC18O15417 LINC01836-201ENST00000586061 829 ntTSL 3 BASIC15.34■□□□□ 0.05
TNRC18O15417 AC009779.7-201ENST00000609031 469 ntBASIC15.34■□□□□ 0.05
TNRC18O15417 AL139260.3-204ENST00000621281 609 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
TNRC18O15417 AC245369.8-201ENST00000636589 306 ntBASIC15.34■□□□□ 0.05
TNRC18O15417 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TNRC18O15417 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
TNRC18O15417 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TNRC18O15417 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC15.34■□□□□ 0.05
TNRC18O15417 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC15.34■□□□□ 0.05
TNRC18O15417 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TNRC18O15417 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
TNRC18O15417 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC15.34■□□□□ 0.05
TNRC18O15417 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
TNRC18O15417 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
TNRC18O15417 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC15.33■□□□□ 0.05
TNRC18O15417 AL031577.1-201ENST00000339867 399 ntBASIC15.33■□□□□ 0.05
TNRC18O15417 RIPPLY2-201ENST00000369687 521 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.05
TNRC18O15417 ABCA1-201ENST00000374733 923 ntTSL 2 BASIC15.33■□□□□ 0.05
TNRC18O15417 PHBP3-201ENST00000412562 819 ntBASIC15.33■□□□□ 0.05
TNRC18O15417 C5orf38-203ENST00000457752 387 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
TNRC18O15417 AC007992.1-201ENST00000513953 953 ntBASIC15.33■□□□□ 0.05
TNRC18O15417 AC007274.3-201ENST00000619838 385 ntBASIC15.33■□□□□ 0.05
TNRC18O15417 TTC39A-216ENST00000530004 1780 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
TNRC18O15417 AP000845.1-201ENST00000581677 2131 ntBASIC15.33■□□□□ 0.05
TNRC18O15417 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
TNRC18O15417 AC064850.1-201ENST00000413279 1398 ntBASIC15.33■□□□□ 0.04
TNRC18O15417 ANXA5-202ENST00000501272 1363 ntTSL 5 BASIC15.33■□□□□ 0.04
TNRC18O15417 TMEM74B-201ENST00000381894 1730 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
TNRC18O15417 AL645608.8-201ENST00000606034 2086 ntBASIC15.33■□□□□ 0.04
TNRC18O15417 AL117190.1-201ENST00000637474 1985 ntTSL 5 BASIC15.33■□□□□ 0.04
TNRC18O15417 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC15.33■□□□□ 0.04
TNRC18O15417 TPT1-201ENST00000309246 1008 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
TNRC18O15417 PKIG-201ENST00000349959 1153 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TNRC18O15417 CMTM5-204ENST00000382809 378 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
TNRC18O15417 PRDX3P2-201ENST00000447051 611 ntBASIC15.33■□□□□ 0.04
TNRC18O15417 AL583804.1-201ENST00000448643 810 ntTSL 3 BASIC15.33■□□□□ 0.04
TNRC18O15417 LINC00887-204ENST00000456816 796 ntTSL 3 BASIC15.33■□□□□ 0.04
TNRC18O15417 PTS-204ENST00000525803 625 ntTSL 3 BASIC15.33■□□□□ 0.04
TNRC18O15417 EIF5A-207ENST00000572815 811 ntTSL 5 BASIC15.33■□□□□ 0.04
TNRC18O15417 ZNF850-201ENST00000589390 523 ntTSL 3 BASIC15.33■□□□□ 0.04
TNRC18O15417 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
TNRC18O15417 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC15.33■□□□□ 0.04
TNRC18O15417 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC15.33■□□□□ 0.04
TNRC18O15417 RAB40A-201ENST00000304236 1969 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
TNRC18O15417 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.04
TNRC18O15417 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TNRC18O15417 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.04
TNRC18O15417 RCBTB2-205ENST00000544492 2622 ntTSL 2 BASIC15.33■□□□□ 0.04
TNRC18O15417 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TNRC18O15417 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC15.33■□□□□ 0.04
TNRC18O15417 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC15.33■□□□□ 0.04
TNRC18O15417 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
TNRC18O15417 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
TNRC18O15417 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC15.33■□□□□ 0.04
TNRC18O15417 IFT22-210ENST00000517481 1657 ntTSL 2 BASIC15.33■□□□□ 0.04
TNRC18O15417 ATP6V1C1-205ENST00000521514 1484 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
TNRC18O15417 MT-ND6-201ENST00000361681 525 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
TNRC18O15417 MRPL55-213ENST00000366740 644 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
TNRC18O15417 SSR3-202ENST00000463503 596 ntTSL 4 BASIC15.33■□□□□ 0.04
TNRC18O15417 RN7SL479P-201ENST00000472003 300 ntBASIC15.33■□□□□ 0.04
TNRC18O15417 PMFBP1-208ENST00000537792 955 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.04
TNRC18O15417 AP000439.1-201ENST00000544004 581 ntTSL 4 BASIC15.33■□□□□ 0.04
TNRC18O15417 C17orf98-201ENST00000614158 632 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
TNRC18O15417 MEP1AP1-201ENST00000636082 1097 ntBASIC15.33■□□□□ 0.04
TNRC18O15417 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
TNRC18O15417 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TNRC18O15417 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
TNRC18O15417 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
TNRC18O15417 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TNRC18O15417 ALDOA-204ENST00000412304 1603 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
TNRC18O15417 AC079328.2-201ENST00000561241 3354 ntBASIC15.32■□□□□ 0.04
TNRC18O15417 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 55.8 ms