Protein–RNA interactions for Protein: O14815

CAPN9, Calpain-9, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN9O14815 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CAPN9O14815 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CAPN9O14815 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC15.74■□□□□ 0.11
CAPN9O14815 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
CAPN9O14815 EPAS1-201ENST00000263734 5166 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CAPN9O14815 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
CAPN9O14815 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CAPN9O14815 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
CAPN9O14815 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CAPN9O14815 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CAPN9O14815 MIR1909-201ENST00000411312 80 ntBASIC15.74■□□□□ 0.11
CAPN9O14815 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC15.74■□□□□ 0.11
CAPN9O14815 CNN2P8-201ENST00000421872 913 ntBASIC15.74■□□□□ 0.11
CAPN9O14815 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC15.74■□□□□ 0.11
CAPN9O14815 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
CAPN9O14815 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC15.74■□□□□ 0.11
CAPN9O14815 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC15.74■□□□□ 0.11
CAPN9O14815 AHRR-211ENST00000515206 462 ntTSL 5 BASIC15.74■□□□□ 0.11
CAPN9O14815 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC15.74■□□□□ 0.11
CAPN9O14815 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC15.74■□□□□ 0.11
CAPN9O14815 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC15.74■□□□□ 0.11
CAPN9O14815 AC078819.1-201ENST00000547454 765 ntBASIC15.74■□□□□ 0.11
CAPN9O14815 AC012085.1-201ENST00000548270 765 ntBASIC15.74■□□□□ 0.11
CAPN9O14815 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC15.74■□□□□ 0.11
CAPN9O14815 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC15.74■□□□□ 0.11
CAPN9O14815 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC15.74■□□□□ 0.11
CAPN9O14815 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC15.74■□□□□ 0.11
CAPN9O14815 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
CAPN9O14815 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC15.74■□□□□ 0.11
CAPN9O14815 RHOXF1P1-202ENST00000635473 501 ntBASIC15.74■□□□□ 0.11
CAPN9O14815 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
CAPN9O14815 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CAPN9O14815 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
CAPN9O14815 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC15.74■□□□□ 0.11
CAPN9O14815 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC15.74■□□□□ 0.11
CAPN9O14815 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
CAPN9O14815 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC15.74■□□□□ 0.11
CAPN9O14815 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CAPN9O14815 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CAPN9O14815 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CAPN9O14815 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC15.73■□□□□ 0.11
CAPN9O14815 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
CAPN9O14815 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC15.73■□□□□ 0.11
CAPN9O14815 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC15.73■□□□□ 0.11
CAPN9O14815 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
CAPN9O14815 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CAPN9O14815 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CAPN9O14815 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CAPN9O14815 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CAPN9O14815 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CAPN9O14815 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
CAPN9O14815 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CAPN9O14815 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CAPN9O14815 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
CAPN9O14815 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CAPN9O14815 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CAPN9O14815 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
CAPN9O14815 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
CAPN9O14815 NME6-203ENST00000415644 849 ntTSL 2 BASIC15.73■□□□□ 0.11
CAPN9O14815 POM121L8P-201ENST00000417732 1281 ntBASIC15.73■□□□□ 0.11
CAPN9O14815 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC15.73■□□□□ 0.11
CAPN9O14815 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC15.73■□□□□ 0.11
CAPN9O14815 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC15.73■□□□□ 0.11
CAPN9O14815 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC15.73■□□□□ 0.11
CAPN9O14815 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
CAPN9O14815 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CAPN9O14815 POM121L9P-203ENST00000441984 1285 ntBASIC15.73■□□□□ 0.11
CAPN9O14815 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC15.73■□□□□ 0.11
CAPN9O14815 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC15.73■□□□□ 0.11
CAPN9O14815 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CAPN9O14815 FTLP10-202ENST00000505798 471 ntBASIC15.73■□□□□ 0.11
CAPN9O14815 AC092658.1-201ENST00000505836 891 ntBASIC15.73■□□□□ 0.11
CAPN9O14815 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
CAPN9O14815 AP000812.2-201ENST00000538934 718 ntBASIC15.73■□□□□ 0.11
CAPN9O14815 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC15.73■□□□□ 0.11
CAPN9O14815 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC15.73■□□□□ 0.11
CAPN9O14815 NAA38-206ENST00000576384 424 ntTSL 2 BASIC15.73■□□□□ 0.11
CAPN9O14815 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC15.73■□□□□ 0.11
CAPN9O14815 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC15.73■□□□□ 0.11
CAPN9O14815 AC133552.6-201ENST00000613406 534 ntBASIC15.73■□□□□ 0.11
CAPN9O14815 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CAPN9O14815 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
CAPN9O14815 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CAPN9O14815 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CAPN9O14815 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CAPN9O14815 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CAPN9O14815 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CAPN9O14815 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
CAPN9O14815 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CAPN9O14815 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC15.73■□□□□ 0.11
CAPN9O14815 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC15.73■□□□□ 0.11
CAPN9O14815 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC15.73■□□□□ 0.11
CAPN9O14815 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CAPN9O14815 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CAPN9O14815 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
CAPN9O14815 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
CAPN9O14815 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
CAPN9O14815 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CAPN9O14815 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC15.72■□□□□ 0.11
CAPN9O14815 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms