Protein–RNA interactions for Protein: O00533

CHL1, Neural cell adhesion molecule L1-like protein, humanhuman

Predictions only

Length 1,208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHL1O00533 AC012618.1-201ENST00000461223 412 ntBASIC18.82■□□□□ 0.6
CHL1O00533 RN7SL11P-201ENST00000471305 293 ntBASIC18.82■□□□□ 0.6
CHL1O00533 AC084346.1-201ENST00000520962 528 ntTSL 4 BASIC18.82■□□□□ 0.6
CHL1O00533 ACP7-202ENST00000594229 1149 ntTSL 5 BASIC18.82■□□□□ 0.6
CHL1O00533 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC18.82■□□□□ 0.6
CHL1O00533 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC18.82■□□□□ 0.6
CHL1O00533 CCNA1-204ENST00000630422 1751 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
CHL1O00533 AC011498.7-201ENST00000624986 2027 ntBASIC18.82■□□□□ 0.6
CHL1O00533 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
CHL1O00533 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CHL1O00533 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC18.82■□□□□ 0.6
CHL1O00533 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC18.82■□□□□ 0.6
CHL1O00533 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CHL1O00533 ZCCHC17-207ENST00000616859 1458 ntTSL 4 BASIC18.82■□□□□ 0.6
CHL1O00533 ZCCHC17-208ENST00000618216 1489 ntTSL 3 BASIC18.82■□□□□ 0.6
CHL1O00533 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
CHL1O00533 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC18.82■□□□□ 0.6
CHL1O00533 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC18.82■□□□□ 0.6
CHL1O00533 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CHL1O00533 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC18.82■□□□□ 0.6
CHL1O00533 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CHL1O00533 LINC01165-201ENST00000445190 1623 ntBASIC18.82■□□□□ 0.6
CHL1O00533 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC18.82■□□□□ 0.6
CHL1O00533 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CHL1O00533 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC18.81■□□□□ 0.6
CHL1O00533 LINC02405-201ENST00000512624 1361 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CHL1O00533 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CHL1O00533 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CHL1O00533 RN7SL832P-201ENST00000607781 1756 ntBASIC18.81■□□□□ 0.6
CHL1O00533 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CHL1O00533 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CHL1O00533 AC064801.2-201ENST00000625052 1303 ntBASIC18.81■□□□□ 0.6
CHL1O00533 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CHL1O00533 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CHL1O00533 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
CHL1O00533 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC18.81■□□□□ 0.6
CHL1O00533 AC239868.1-201ENST00000369385 493 ntBASIC18.81■□□□□ 0.6
CHL1O00533 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CHL1O00533 AL662890.1-201ENST00000396818 632 ntBASIC18.81■□□□□ 0.6
CHL1O00533 APOL3-207ENST00000424878 1240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CHL1O00533 FKBP11-202ENST00000444214 630 ntTSL 2 BASIC18.81■□□□□ 0.6
CHL1O00533 AC104561.3-201ENST00000518590 715 ntTSL 5 BASIC18.81■□□□□ 0.6
CHL1O00533 AL136088.1-202ENST00000525871 439 ntTSL 2 BASIC18.81■□□□□ 0.6
CHL1O00533 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CHL1O00533 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
CHL1O00533 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC18.81■□□□□ 0.6
CHL1O00533 LINC01517-203ENST00000616194 908 ntTSL 5 BASIC18.81■□□□□ 0.6
CHL1O00533 NAP1L6-202ENST00000641404 1222 ntBASIC18.81■□□□□ 0.6
CHL1O00533 LINC02228-204ENST00000642115 2962 ntBASIC18.81■□□□□ 0.6
CHL1O00533 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC18.81■□□□□ 0.6
CHL1O00533 SMTNL1-202ENST00000527972 1649 ntAPPRIS P2 TSL 5 BASIC18.81■□□□□ 0.6
CHL1O00533 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC18.81■□□□□ 0.6
CHL1O00533 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC18.81■□□□□ 0.6
CHL1O00533 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC18.81■□□□□ 0.6
CHL1O00533 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CHL1O00533 TMEM106A-202ENST00000541594 1330 ntTSL 2 BASIC18.8■□□□□ 0.6
CHL1O00533 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CHL1O00533 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CHL1O00533 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC18.8■□□□□ 0.6
CHL1O00533 ABI2-215ENST00000430418 1676 ntTSL 5 BASIC18.8■□□□□ 0.6
CHL1O00533 CYP4B1-202ENST00000371919 1494 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CHL1O00533 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CHL1O00533 JTB-202ENST00000356648 1040 ntTSL 2 BASIC18.8■□□□□ 0.6
CHL1O00533 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CHL1O00533 IFITM5-201ENST00000382614 736 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CHL1O00533 CD300A-204ENST00000392625 1163 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CHL1O00533 DMAC2-203ENST00000417807 1065 ntTSL 2 BASIC18.8■□□□□ 0.6
CHL1O00533 PDIA3P2-201ENST00000428073 158 ntBASIC18.8■□□□□ 0.6
CHL1O00533 MSRA-203ENST00000441698 788 ntTSL 2 BASIC18.8■□□□□ 0.6
CHL1O00533 AL161719.1-201ENST00000442716 385 ntTSL 5 BASIC18.8■□□□□ 0.6
CHL1O00533 AC005234.1-201ENST00000457851 434 ntTSL 3 BASIC18.8■□□□□ 0.6
CHL1O00533 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC18.8■□□□□ 0.6
CHL1O00533 MIR3188-201ENST00000583494 85 ntBASIC18.8■□□□□ 0.6
CHL1O00533 SNRPD2-206ENST00000588301 702 ntAPPRIS P1 TSL 3 BASIC18.8■□□□□ 0.6
CHL1O00533 AL606495.2-201ENST00000605867 535 ntBASIC18.8■□□□□ 0.6
CHL1O00533 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC18.8■□□□□ 0.6
CHL1O00533 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
CHL1O00533 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
CHL1O00533 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CHL1O00533 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC18.8■□□□□ 0.6
CHL1O00533 KIAA1614-AS1-201ENST00000415647 1440 ntTSL 2 BASIC18.8■□□□□ 0.6
CHL1O00533 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CHL1O00533 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC18.8■□□□□ 0.6
CHL1O00533 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CHL1O00533 AC103702.1-201ENST00000548801 2630 ntBASIC18.8■□□□□ 0.6
CHL1O00533 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CHL1O00533 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CHL1O00533 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CHL1O00533 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC18.8■□□□□ 0.6
CHL1O00533 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CHL1O00533 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CHL1O00533 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CHL1O00533 WARS-203ENST00000358655 2466 ntTSL 2 BASIC18.79■□□□□ 0.6
CHL1O00533 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CHL1O00533 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CHL1O00533 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CHL1O00533 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CHL1O00533 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CHL1O00533 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CHL1O00533 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC18.79■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms