Protein–RNA interactions for Protein: O00526

UPK2, Uroplakin-2, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK2O00526 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
UPK2O00526 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
UPK2O00526 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
UPK2O00526 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC11.93□□□□□ -0.5
UPK2O00526 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
UPK2O00526 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC11.93□□□□□ -0.5
UPK2O00526 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
UPK2O00526 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC11.93□□□□□ -0.5
UPK2O00526 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
UPK2O00526 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC11.93□□□□□ -0.5
UPK2O00526 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
UPK2O00526 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
UPK2O00526 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
UPK2O00526 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC11.93□□□□□ -0.5
UPK2O00526 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
UPK2O00526 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
UPK2O00526 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
UPK2O00526 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC11.93□□□□□ -0.5
UPK2O00526 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
UPK2O00526 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
UPK2O00526 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
UPK2O00526 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
UPK2O00526 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
UPK2O00526 CALY-202ENST00000368555 783 ntTSL 2 BASIC11.93□□□□□ -0.5
UPK2O00526 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
UPK2O00526 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC11.93□□□□□ -0.5
UPK2O00526 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC11.93□□□□□ -0.5
UPK2O00526 SERBP1P5-201ENST00000510079 1181 ntBASIC11.93□□□□□ -0.5
UPK2O00526 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC11.93□□□□□ -0.5
UPK2O00526 AL132655.2-201ENST00000596276 594 ntBASIC11.93□□□□□ -0.5
UPK2O00526 AC004466.1-201ENST00000599515 1080 ntBASIC11.93□□□□□ -0.5
UPK2O00526 CHCHD2P3-201ENST00000603038 451 ntBASIC11.93□□□□□ -0.5
UPK2O00526 AC004233.3-201ENST00000607794 1269 ntBASIC11.93□□□□□ -0.5
UPK2O00526 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
UPK2O00526 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC11.93□□□□□ -0.5
UPK2O00526 AC020910.6-201ENST00000623084 1459 ntBASIC11.93□□□□□ -0.5
UPK2O00526 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
UPK2O00526 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
UPK2O00526 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
UPK2O00526 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
UPK2O00526 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
UPK2O00526 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
UPK2O00526 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
UPK2O00526 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
UPK2O00526 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC11.93□□□□□ -0.5
UPK2O00526 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC11.93□□□□□ -0.5
UPK2O00526 AC011474.4-201ENST00000623523 2076 ntBASIC11.93□□□□□ -0.5
UPK2O00526 AC015688.4-201ENST00000580780 1647 ntBASIC11.93□□□□□ -0.5
UPK2O00526 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC11.93□□□□□ -0.5
UPK2O00526 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
UPK2O00526 WARS-203ENST00000358655 2466 ntTSL 2 BASIC11.93□□□□□ -0.5
UPK2O00526 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
UPK2O00526 ACAN-202ENST00000439576 8840 ntAPPRIS P2 TSL 5 BASIC11.93□□□□□ -0.5
UPK2O00526 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
UPK2O00526 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.5
UPK2O00526 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC11.92□□□□□ -0.5
UPK2O00526 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
UPK2O00526 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
UPK2O00526 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
UPK2O00526 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC11.92□□□□□ -0.5
UPK2O00526 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
UPK2O00526 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC11.92□□□□□ -0.5
UPK2O00526 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC11.92□□□□□ -0.5
UPK2O00526 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC11.92□□□□□ -0.5
UPK2O00526 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
UPK2O00526 C4B-201ENST00000425700 5237 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
UPK2O00526 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC11.92□□□□□ -0.5
UPK2O00526 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
UPK2O00526 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
UPK2O00526 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.5
UPK2O00526 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
UPK2O00526 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC11.92□□□□□ -0.5
UPK2O00526 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
UPK2O00526 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
UPK2O00526 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
UPK2O00526 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
UPK2O00526 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
UPK2O00526 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
UPK2O00526 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
UPK2O00526 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
UPK2O00526 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC11.92□□□□□ -0.5
UPK2O00526 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC11.92□□□□□ -0.5
UPK2O00526 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
UPK2O00526 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
UPK2O00526 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
UPK2O00526 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC11.92□□□□□ -0.5
UPK2O00526 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
UPK2O00526 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
UPK2O00526 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
UPK2O00526 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
UPK2O00526 CLUHP6-201ENST00000580789 941 ntBASIC11.92□□□□□ -0.5
UPK2O00526 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC11.92□□□□□ -0.5
UPK2O00526 ATF5-205ENST00000600336 682 ntTSL 2 BASIC11.92□□□□□ -0.5
UPK2O00526 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
UPK2O00526 AC006538.3-201ENST00000612495 578 ntBASIC11.92□□□□□ -0.5
UPK2O00526 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC11.92□□□□□ -0.5
UPK2O00526 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC11.92□□□□□ -0.5
UPK2O00526 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
UPK2O00526 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
UPK2O00526 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms