Protein–RNA interactions for Protein: O00329

PIK3CD, Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit delta isoform, humanhuman

Predictions only

Length 1,044 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PIK3CDO00329 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
PIK3CDO00329 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PIK3CDO00329 AL157791.1-201ENST00000553667 1699 ntBASIC16.65■□□□□ 0.26
PIK3CDO00329 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC16.65■□□□□ 0.26
PIK3CDO00329 MPI-203ENST00000535694 1523 ntTSL 2 BASIC16.65■□□□□ 0.26
PIK3CDO00329 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
PIK3CDO00329 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC16.65■□□□□ 0.26
PIK3CDO00329 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
PIK3CDO00329 AC018629.1-201ENST00000623381 1736 ntBASIC16.65■□□□□ 0.26
PIK3CDO00329 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PIK3CDO00329 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
PIK3CDO00329 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
PIK3CDO00329 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.26
PIK3CDO00329 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC16.64■□□□□ 0.26
PIK3CDO00329 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PIK3CDO00329 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC16.64■□□□□ 0.25
PIK3CDO00329 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC16.64■□□□□ 0.25
PIK3CDO00329 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PIK3CDO00329 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PIK3CDO00329 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PIK3CDO00329 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
PIK3CDO00329 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
PIK3CDO00329 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PIK3CDO00329 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PIK3CDO00329 AL596276.2-201ENST00000447525 331 ntBASIC16.64■□□□□ 0.25
PIK3CDO00329 TSACC-208ENST00000481479 741 ntTSL 2 BASIC16.64■□□□□ 0.25
PIK3CDO00329 CLDN11-207ENST00000486975 1139 ntTSL 2 BASIC16.64■□□□□ 0.25
PIK3CDO00329 HHIP-AS1-201ENST00000503066 897 ntTSL 5 BASIC16.64■□□□□ 0.25
PIK3CDO00329 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC16.64■□□□□ 0.25
PIK3CDO00329 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PIK3CDO00329 RN7SL371P-201ENST00000578099 267 ntBASIC16.64■□□□□ 0.25
PIK3CDO00329 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC16.64■□□□□ 0.25
PIK3CDO00329 AC091544.8-201ENST00000619490 361 ntBASIC16.64■□□□□ 0.25
PIK3CDO00329 AC138627.1-207ENST00000641560 1006 ntBASIC16.64■□□□□ 0.25
PIK3CDO00329 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC16.64■□□□□ 0.25
PIK3CDO00329 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PIK3CDO00329 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC16.64■□□□□ 0.25
PIK3CDO00329 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PIK3CDO00329 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
PIK3CDO00329 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PIK3CDO00329 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PIK3CDO00329 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC16.63■□□□□ 0.25
PIK3CDO00329 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PIK3CDO00329 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
PIK3CDO00329 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
PIK3CDO00329 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PIK3CDO00329 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC16.63■□□□□ 0.25
PIK3CDO00329 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC16.63■□□□□ 0.25
PIK3CDO00329 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PIK3CDO00329 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
PIK3CDO00329 RAB36-202ENST00000341989 936 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PIK3CDO00329 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PIK3CDO00329 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC16.63■□□□□ 0.25
PIK3CDO00329 IGLC7-201ENST00000390331 441 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
PIK3CDO00329 HNRNPA1P41-201ENST00000397777 928 ntBASIC16.63■□□□□ 0.25
PIK3CDO00329 ACTG1P2-201ENST00000415776 1125 ntBASIC16.63■□□□□ 0.25
PIK3CDO00329 ACTG1P11-201ENST00000425411 1125 ntBASIC16.63■□□□□ 0.25
PIK3CDO00329 OR2R1P-201ENST00000441404 914 ntBASIC16.63■□□□□ 0.25
PIK3CDO00329 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC16.63■□□□□ 0.25
PIK3CDO00329 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC16.63■□□□□ 0.25
PIK3CDO00329 TPI1-206ENST00000488464 791 ntTSL 5 BASIC16.63■□□□□ 0.25
PIK3CDO00329 CMTM3-215ENST00000568477 687 ntTSL 3 BASIC16.63■□□□□ 0.25
PIK3CDO00329 AC025810.1-201ENST00000569986 981 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PIK3CDO00329 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC16.63■□□□□ 0.25
PIK3CDO00329 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PIK3CDO00329 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PIK3CDO00329 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC16.63■□□□□ 0.25
PIK3CDO00329 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC16.63■□□□□ 0.25
PIK3CDO00329 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PIK3CDO00329 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC16.63■□□□□ 0.25
PIK3CDO00329 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
PIK3CDO00329 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PIK3CDO00329 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
PIK3CDO00329 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC16.63■□□□□ 0.25
PIK3CDO00329 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
PIK3CDO00329 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC16.63■□□□□ 0.25
PIK3CDO00329 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC16.63■□□□□ 0.25
PIK3CDO00329 FAM45A-201ENST00000361432 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PIK3CDO00329 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC16.63■□□□□ 0.25
PIK3CDO00329 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
PIK3CDO00329 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PIK3CDO00329 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
PIK3CDO00329 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC16.63■□□□□ 0.25
PIK3CDO00329 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
PIK3CDO00329 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
PIK3CDO00329 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PIK3CDO00329 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC16.62■□□□□ 0.25
PIK3CDO00329 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC16.62■□□□□ 0.25
PIK3CDO00329 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC16.62■□□□□ 0.25
PIK3CDO00329 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
PIK3CDO00329 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PIK3CDO00329 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PIK3CDO00329 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PIK3CDO00329 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
PIK3CDO00329 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
PIK3CDO00329 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PIK3CDO00329 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
PIK3CDO00329 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC16.62■□□□□ 0.25
PIK3CDO00329 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
PIK3CDO00329 AC024681.1-201ENST00000521917 487 ntBASIC16.62■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 70.5 ms