Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC14.07□□□□□ -0.16
UPK1AO00322 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
UPK1AO00322 MIR5189-201ENST00000577370 114 ntBASIC14.07□□□□□ -0.16
UPK1AO00322 AC027307.3-201ENST00000594262 1100 ntBASIC14.07□□□□□ -0.16
UPK1AO00322 AC010319.3-201ENST00000597028 470 ntBASIC14.07□□□□□ -0.16
UPK1AO00322 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
UPK1AO00322 TSPEAR-AS2-202ENST00000354333 2422 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
UPK1AO00322 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC14.07□□□□□ -0.16
UPK1AO00322 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC14.07□□□□□ -0.16
UPK1AO00322 ATRIP-204ENST00000412052 2721 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
UPK1AO00322 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
UPK1AO00322 RNASEH2C-201ENST00000308418 2794 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
UPK1AO00322 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC14.07□□□□□ -0.16
UPK1AO00322 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
UPK1AO00322 DEPTOR-201ENST00000286234 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
UPK1AO00322 SHPK-201ENST00000225519 3838 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
UPK1AO00322 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
UPK1AO00322 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
UPK1AO00322 CPA5-205ENST00000466363 2099 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
UPK1AO00322 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC14.06□□□□□ -0.16
UPK1AO00322 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
UPK1AO00322 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
UPK1AO00322 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
UPK1AO00322 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
UPK1AO00322 RER1-207ENST00000488353 2469 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
UPK1AO00322 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC14.06□□□□□ -0.16
UPK1AO00322 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
UPK1AO00322 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
UPK1AO00322 HNRNPH1-204ENST00000442819 2248 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
UPK1AO00322 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
UPK1AO00322 OR2I1P-210ENST00000642037 4691 ntBASIC14.06□□□□□ -0.16
UPK1AO00322 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
UPK1AO00322 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
UPK1AO00322 GPER1-203ENST00000397092 2971 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
UPK1AO00322 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC14.06□□□□□ -0.16
UPK1AO00322 LDB3-209ENST00000623056 2314 ntTSL 5 BASIC14.06□□□□□ -0.16
UPK1AO00322 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC14.06□□□□□ -0.16
UPK1AO00322 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
UPK1AO00322 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
UPK1AO00322 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
UPK1AO00322 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC14.06□□□□□ -0.16
UPK1AO00322 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
UPK1AO00322 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC14.06□□□□□ -0.16
UPK1AO00322 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
UPK1AO00322 AC012441.1-201ENST00000446669 685 ntBASIC14.06□□□□□ -0.16
UPK1AO00322 RN7SL752P-201ENST00000463779 287 ntBASIC14.06□□□□□ -0.16
UPK1AO00322 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
UPK1AO00322 NEU3-203ENST00000529024 581 ntTSL 3 BASIC14.06□□□□□ -0.16
UPK1AO00322 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC14.06□□□□□ -0.16
UPK1AO00322 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC14.06□□□□□ -0.16
UPK1AO00322 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
UPK1AO00322 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC14.06□□□□□ -0.16
UPK1AO00322 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC14.06□□□□□ -0.16
UPK1AO00322 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
UPK1AO00322 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
UPK1AO00322 HBP1-212ENST00000485846 2420 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
UPK1AO00322 NDUFS7-202ENST00000313408 2818 ntTSL 2 BASIC14.06□□□□□ -0.16
UPK1AO00322 AC134312.5-201ENST00000568031 1313 ntBASIC14.06□□□□□ -0.16
UPK1AO00322 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC14.06□□□□□ -0.16
UPK1AO00322 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
UPK1AO00322 CD48-201ENST00000368045 1793 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
UPK1AO00322 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
UPK1AO00322 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
UPK1AO00322 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
UPK1AO00322 ZNF609-202ENST00000416172 3863 ntTSL 2 BASIC14.06□□□□□ -0.16
UPK1AO00322 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
UPK1AO00322 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC14.06□□□□□ -0.16
UPK1AO00322 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC14.06□□□□□ -0.16
UPK1AO00322 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
UPK1AO00322 CPT1B-202ENST00000360719 2319 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
UPK1AO00322 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
UPK1AO00322 PRAME-214ENST00000543184 2758 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
UPK1AO00322 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
UPK1AO00322 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
UPK1AO00322 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC14.05□□□□□ -0.16
UPK1AO00322 AC068888.1-207ENST00000546793 2863 ntTSL 2 BASIC14.05□□□□□ -0.16
UPK1AO00322 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC14.05□□□□□ -0.16
UPK1AO00322 GRM7-203ENST00000389336 2901 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
UPK1AO00322 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
UPK1AO00322 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC14.05□□□□□ -0.16
UPK1AO00322 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
UPK1AO00322 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
UPK1AO00322 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
UPK1AO00322 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
UPK1AO00322 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
UPK1AO00322 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
UPK1AO00322 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
UPK1AO00322 MGST3-203ENST00000367885 680 ntTSL 2 BASIC14.05□□□□□ -0.16
UPK1AO00322 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
UPK1AO00322 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
UPK1AO00322 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
UPK1AO00322 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
UPK1AO00322 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
UPK1AO00322 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC14.05□□□□□ -0.16
UPK1AO00322 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC14.05□□□□□ -0.16
UPK1AO00322 TDH-203ENST00000531764 1110 ntBASIC14.05□□□□□ -0.16
UPK1AO00322 PTP4A1P2-201ENST00000546033 454 ntBASIC14.05□□□□□ -0.16
UPK1AO00322 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
UPK1AO00322 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC14.05□□□□□ -0.16
UPK1AO00322 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC14.05□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 73.3 ms