Protein–RNA interactions for Protein: A8K010

LINC00473, Putative transcriptional regulator encoded by LINC00473, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00473A8K010 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
LINC00473A8K010 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
LINC00473A8K010 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC12.1□□□□□ -0.47
LINC00473A8K010 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
LINC00473A8K010 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
LINC00473A8K010 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC12.09□□□□□ -0.47
LINC00473A8K010 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
LINC00473A8K010 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
LINC00473A8K010 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC12.09□□□□□ -0.47
LINC00473A8K010 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC12.09□□□□□ -0.47
LINC00473A8K010 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
LINC00473A8K010 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
LINC00473A8K010 AC215219.1-201ENST00000400706 1817 ntBASIC12.09□□□□□ -0.47
LINC00473A8K010 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
LINC00473A8K010 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
LINC00473A8K010 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC12.09□□□□□ -0.47
LINC00473A8K010 AC020910.6-201ENST00000623084 1459 ntBASIC12.09□□□□□ -0.47
LINC00473A8K010 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
LINC00473A8K010 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC12.09□□□□□ -0.47
LINC00473A8K010 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
LINC00473A8K010 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
LINC00473A8K010 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC12.09□□□□□ -0.47
LINC00473A8K010 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC12.09□□□□□ -0.47
LINC00473A8K010 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
LINC00473A8K010 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC12.09□□□□□ -0.47
LINC00473A8K010 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
LINC00473A8K010 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
LINC00473A8K010 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC12.09□□□□□ -0.47
LINC00473A8K010 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
LINC00473A8K010 RN7SKP230-201ENST00000365642 335 ntBASIC12.09□□□□□ -0.47
LINC00473A8K010 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
LINC00473A8K010 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC12.09□□□□□ -0.47
LINC00473A8K010 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
LINC00473A8K010 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
LINC00473A8K010 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC12.09□□□□□ -0.47
LINC00473A8K010 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC12.09□□□□□ -0.47
LINC00473A8K010 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
LINC00473A8K010 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
LINC00473A8K010 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC12.09□□□□□ -0.47
LINC00473A8K010 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
LINC00473A8K010 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC12.09□□□□□ -0.47
LINC00473A8K010 TSPY16P-201ENST00000449843 468 ntBASIC12.09□□□□□ -0.47
LINC00473A8K010 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
LINC00473A8K010 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
LINC00473A8K010 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
LINC00473A8K010 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC12.09□□□□□ -0.47
LINC00473A8K010 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC12.09□□□□□ -0.47
LINC00473A8K010 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC12.09□□□□□ -0.47
LINC00473A8K010 AP001063.1-201ENST00000568332 529 ntBASIC12.09□□□□□ -0.47
LINC00473A8K010 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC12.09□□□□□ -0.47
LINC00473A8K010 INO80C-206ENST00000586489 594 ntTSL 3 BASIC12.09□□□□□ -0.47
LINC00473A8K010 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC12.09□□□□□ -0.47
LINC00473A8K010 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
LINC00473A8K010 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC12.09□□□□□ -0.47
LINC00473A8K010 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC12.09□□□□□ -0.47
LINC00473A8K010 AC011840.2-201ENST00000563063 1520 ntBASIC12.09□□□□□ -0.47
LINC00473A8K010 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
LINC00473A8K010 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
LINC00473A8K010 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC12.09□□□□□ -0.47
LINC00473A8K010 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC12.09□□□□□ -0.47
LINC00473A8K010 AC011498.7-201ENST00000624986 2027 ntBASIC12.09□□□□□ -0.47
LINC00473A8K010 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC12.09□□□□□ -0.47
LINC00473A8K010 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
LINC00473A8K010 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC12.09□□□□□ -0.47
LINC00473A8K010 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
LINC00473A8K010 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
LINC00473A8K010 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
LINC00473A8K010 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
LINC00473A8K010 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
LINC00473A8K010 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
LINC00473A8K010 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
LINC00473A8K010 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC12.09□□□□□ -0.47
LINC00473A8K010 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
LINC00473A8K010 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
LINC00473A8K010 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC12.09□□□□□ -0.47
LINC00473A8K010 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
LINC00473A8K010 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
LINC00473A8K010 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
LINC00473A8K010 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
LINC00473A8K010 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
LINC00473A8K010 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
LINC00473A8K010 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
LINC00473A8K010 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
LINC00473A8K010 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
LINC00473A8K010 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
LINC00473A8K010 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC12.09□□□□□ -0.47
LINC00473A8K010 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
LINC00473A8K010 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC12.08□□□□□ -0.47
LINC00473A8K010 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC12.08□□□□□ -0.47
LINC00473A8K010 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
LINC00473A8K010 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
LINC00473A8K010 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC12.08□□□□□ -0.47
LINC00473A8K010 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC12.08□□□□□ -0.47
LINC00473A8K010 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC12.08□□□□□ -0.47
LINC00473A8K010 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.47
LINC00473A8K010 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC12.08□□□□□ -0.48
LINC00473A8K010 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
LINC00473A8K010 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
LINC00473A8K010 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
LINC00473A8K010 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms