Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
TCRBV4S1A1TA0A5B7 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC11.99□□□□□ -0.49
TCRBV4S1A1TA0A5B7 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
TCRBV4S1A1TA0A5B7 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
TCRBV4S1A1TA0A5B7 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
TCRBV4S1A1TA0A5B7 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC11.99□□□□□ -0.49
TCRBV4S1A1TA0A5B7 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
TCRBV4S1A1TA0A5B7 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC11.99□□□□□ -0.49
TCRBV4S1A1TA0A5B7 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC11.99□□□□□ -0.49
TCRBV4S1A1TA0A5B7 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
TCRBV4S1A1TA0A5B7 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC11.99□□□□□ -0.49
TCRBV4S1A1TA0A5B7 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
TCRBV4S1A1TA0A5B7 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
TCRBV4S1A1TA0A5B7 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC11.99□□□□□ -0.49
TCRBV4S1A1TA0A5B7 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
TCRBV4S1A1TA0A5B7 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
TCRBV4S1A1TA0A5B7 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC11.99□□□□□ -0.49
TCRBV4S1A1TA0A5B7 NUS1P3-201ENST00000423502 862 ntBASIC11.99□□□□□ -0.49
TCRBV4S1A1TA0A5B7 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC11.99□□□□□ -0.49
TCRBV4S1A1TA0A5B7 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
TCRBV4S1A1TA0A5B7 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
TCRBV4S1A1TA0A5B7 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC11.99□□□□□ -0.49
TCRBV4S1A1TA0A5B7 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC11.99□□□□□ -0.49
TCRBV4S1A1TA0A5B7 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
TCRBV4S1A1TA0A5B7 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC11.99□□□□□ -0.49
TCRBV4S1A1TA0A5B7 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC11.99□□□□□ -0.49
TCRBV4S1A1TA0A5B7 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC11.99□□□□□ -0.49
TCRBV4S1A1TA0A5B7 AC010328.2-201ENST00000597698 1111 ntBASIC11.99□□□□□ -0.49
TCRBV4S1A1TA0A5B7 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC11.99□□□□□ -0.49
TCRBV4S1A1TA0A5B7 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC11.99□□□□□ -0.49
TCRBV4S1A1TA0A5B7 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
TCRBV4S1A1TA0A5B7 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
TCRBV4S1A1TA0A5B7 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC11.99□□□□□ -0.49
TCRBV4S1A1TA0A5B7 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC11.99□□□□□ -0.49
TCRBV4S1A1TA0A5B7 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC11.99□□□□□ -0.49
TCRBV4S1A1TA0A5B7 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
TCRBV4S1A1TA0A5B7 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
TCRBV4S1A1TA0A5B7 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC11.99□□□□□ -0.49
TCRBV4S1A1TA0A5B7 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
TCRBV4S1A1TA0A5B7 TKT-201ENST00000296289 1931 ntTSL 5 BASIC11.99□□□□□ -0.49
TCRBV4S1A1TA0A5B7 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
TCRBV4S1A1TA0A5B7 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC11.99□□□□□ -0.49
TCRBV4S1A1TA0A5B7 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC11.99□□□□□ -0.49
TCRBV4S1A1TA0A5B7 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
TCRBV4S1A1TA0A5B7 ADGRL1-201ENST00000340736 7853 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
TCRBV4S1A1TA0A5B7 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
TCRBV4S1A1TA0A5B7 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
TCRBV4S1A1TA0A5B7 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
TCRBV4S1A1TA0A5B7 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC11.99□□□□□ -0.49
TCRBV4S1A1TA0A5B7 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
TCRBV4S1A1TA0A5B7 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
TCRBV4S1A1TA0A5B7 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC11.99□□□□□ -0.49
TCRBV4S1A1TA0A5B7 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC11.99□□□□□ -0.49
TCRBV4S1A1TA0A5B7 RSBN1-201ENST00000261441 6621 ntAPPRIS P1 TSL 2 BASIC11.99□□□□□ -0.49
TCRBV4S1A1TA0A5B7 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
TCRBV4S1A1TA0A5B7 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC11.98□□□□□ -0.49
TCRBV4S1A1TA0A5B7 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
TCRBV4S1A1TA0A5B7 CNTNAP3P2-201ENST00000617175 3861 ntBASIC11.98□□□□□ -0.49
TCRBV4S1A1TA0A5B7 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
TCRBV4S1A1TA0A5B7 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
TCRBV4S1A1TA0A5B7 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
TCRBV4S1A1TA0A5B7 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
TCRBV4S1A1TA0A5B7 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
TCRBV4S1A1TA0A5B7 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
TCRBV4S1A1TA0A5B7 LATS1-207ENST00000543571 7517 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
TCRBV4S1A1TA0A5B7 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
TCRBV4S1A1TA0A5B7 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC11.98□□□□□ -0.49
TCRBV4S1A1TA0A5B7 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
TCRBV4S1A1TA0A5B7 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC11.98□□□□□ -0.49
TCRBV4S1A1TA0A5B7 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC11.98□□□□□ -0.49
TCRBV4S1A1TA0A5B7 HSPA7-201ENST00000445535 1927 ntBASIC11.98□□□□□ -0.49
TCRBV4S1A1TA0A5B7 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
TCRBV4S1A1TA0A5B7 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC11.98□□□□□ -0.49
TCRBV4S1A1TA0A5B7 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC11.98□□□□□ -0.49
TCRBV4S1A1TA0A5B7 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
TCRBV4S1A1TA0A5B7 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC11.98□□□□□ -0.49
TCRBV4S1A1TA0A5B7 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
TCRBV4S1A1TA0A5B7 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
TCRBV4S1A1TA0A5B7 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
TCRBV4S1A1TA0A5B7 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
TCRBV4S1A1TA0A5B7 LILRP1-201ENST00000444199 1370 ntBASIC11.98□□□□□ -0.49
TCRBV4S1A1TA0A5B7 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
TCRBV4S1A1TA0A5B7 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
TCRBV4S1A1TA0A5B7 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
TCRBV4S1A1TA0A5B7 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
TCRBV4S1A1TA0A5B7 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
TCRBV4S1A1TA0A5B7 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
TCRBV4S1A1TA0A5B7 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
TCRBV4S1A1TA0A5B7 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC11.98□□□□□ -0.49
TCRBV4S1A1TA0A5B7 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC11.98□□□□□ -0.49
TCRBV4S1A1TA0A5B7 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
TCRBV4S1A1TA0A5B7 AC114812.1-204ENST00000449669 728 ntBASIC11.98□□□□□ -0.49
TCRBV4S1A1TA0A5B7 AC004066.1-201ENST00000502488 802 ntBASIC11.98□□□□□ -0.49
TCRBV4S1A1TA0A5B7 AHRR-211ENST00000515206 462 ntTSL 5 BASIC11.98□□□□□ -0.49
TCRBV4S1A1TA0A5B7 RNA5SP412-201ENST00000516234 123 ntBASIC11.98□□□□□ -0.49
TCRBV4S1A1TA0A5B7 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC11.98□□□□□ -0.49
TCRBV4S1A1TA0A5B7 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC11.98□□□□□ -0.49
TCRBV4S1A1TA0A5B7 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC11.98□□□□□ -0.49
TCRBV4S1A1TA0A5B7 AC023310.1-201ENST00000554836 735 ntBASIC11.98□□□□□ -0.49
TCRBV4S1A1TA0A5B7 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC11.98□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 128.4 ms